DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4615 and mmd

DIOPT Version :9

Sequence 1:NP_572382.1 Gene:CG4615 / 31656 FlyBaseID:FBgn0029935 Length:313 Species:Drosophila melanogaster
Sequence 2:XP_002937857.1 Gene:mmd / 100101788 XenbaseID:XB-GENE-484435 Length:243 Species:Xenopus tropicalis


Alignment Length:248 Identity:105/248 - (42%)
Similarity:134/248 - (54%) Gaps:27/248 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 KWKNAKAKPGCAYQPTEIEQVANVITHGIWILPAVFAAIKLFERSSSASQYLVAWVYGGALCMLF 131
            |:.|.:|...|.|:||..|..||..||...|:|::..:..|...|....:.:.||:||..||.||
 Frog    13 KFMNHRAPANCRYKPTWYEHAANCYTHAFLIVPSIVGSALLHRLSDDRWEKITAWIYGMGLCALF 77

  Fly   132 TVSTFFHCSCYCAEHKPPKNVKAWPCLGWQTYQGLKNVLHRCDRAMIYVFIAGSYFPWLTLEN-- 194
            .|||.||...:...|                .:.:::..|.|||.:||.|||.||.|||.|..  
 Frog    78 IVSTVFHIVTWKKSH----------------LRSVEHCFHMCDRMVIYFFIAASYAPWLNLRELG 126

  Fly   195 --TDHSAILFCMEWVIWLMAGIGIAYQQVFHERYKCLETFFYLVMGLGPALVVVFTGHHFHGMMQ 257
              ..|      |.|.|||||..|..|..::||:||.:|..|||.||..|||||. :.::..|:.:
 Frog   127 PMASH------MRWFIWLMAVGGTVYVFLYHEKYKIVELLFYLAMGFSPALVVT-SMNNTEGLHE 184

  Fly   258 LKFGGGFYILGIVFFKADGTIPMAHAIWHLFVVLAAGCHYYAILVNLYPSEGA 310
            |.:||..|.||::|||:||.||.|||||||||.|||..|||||...||.|..|
 Frog   185 LAWGGLIYCLGVIFFKSDGIIPFAHAIWHLFVALAAAVHYYAIWKYLYKSPSA 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4615NP_572382.1 hlyIII 85..304 CDD:273425 94/222 (42%)
mmdXP_002937857.1 hlyIII 31..231 CDD:273425 94/222 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 138 1.000 Domainoid score I4820
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H8204
Inparanoid 1 1.050 196 1.000 Inparanoid score I3702
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1487730at2759
OrthoFinder 1 1.000 - - FOG0003169
OrthoInspector 1 1.000 - - oto105211
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2564
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.060

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