DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4607 and ARN1

DIOPT Version :9

Sequence 1:NP_572380.1 Gene:CG4607 / 31653 FlyBaseID:FBgn0029932 Length:525 Species:Drosophila melanogaster
Sequence 2:NP_011823.1 Gene:ARN1 / 856345 SGDID:S000001032 Length:627 Species:Saccharomyces cerevisiae


Alignment Length:304 Identity:59/304 - (19%)
Similarity:106/304 - (34%) Gaps:92/304 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 DETQPFWLNKDESSWFASIQNMACPLGGLLVSYFLDRI-----GRKHTILL----------TNLI 124
            |...|:.|.||.:.|           ..:.:|:.:|.|     ...:|:::          |.:.
Yeast   347 DPILPYRLVKDRAVW-----------SSMGISFLIDFIYYMAADYLYTVMIVAVNESVKSATRIA 400

  Fly   125 GLIGWILLVTSFMHSDRDMIYYQMLLGRCFGGIMIGMFVSPVGVYSAEISLPKIRGRLILGTSLG 189
            .|..::..|.|        .::.:|:.||                      .:::..::.|.:|.
Yeast   401 TLSSFVSTVAS--------PFFALLVTRC----------------------TRLKPFIMFGCALW 435

  Fly   190 L-ASGILLMYCLGYFIRHNIQL---IFGISCCYQLAATLLVFPMPESPSWLLTRGKEERAR-KSL 249
            : |.|:|      |..|...|.   |.|..|.:.:..||..:|:..|....::.  |..|. .:|
Yeast   436 MVAMGLL------YHFRGGSQSHSGIIGALCVWGVGTTLFTYPVTVSVQSAVSH--ENMATVTAL 492

  Fly   250 RY--FR-----GLPKKEVDYVPEFEAELAHMKELADASNTTAAGESLSQMIHRPEVY------KP 301
            .|  :|     |.......:......::  :|.:.|.:..|.|.||....|   |.|      :.
Yeast   493 NYTLYRIGSAVGSAVSGAIWTQTLYKQI--LKRMGDVALATTAYESPYTFI---ETYTWGTPQRN 552

  Fly   302 VLMMTTFFGFQQACGVVVIIVYAVQIAQQAGVTIDPVL---VAV 342
            .||  ..:.:.|....:|.:|:.|.:...:....||.|   |||
Yeast   553 ALM--NAYKYVQRLETIVALVFCVPLIAFSLCLRDPKLTDTVAV 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4607NP_572380.1 MFS 55..484 CDD:119392 59/304 (19%)
SP 67..495 CDD:273317 59/304 (19%)
ARN1NP_011823.1 MFS_ARN_like 74..586 CDD:340880 53/294 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.