DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4607 and ARN2

DIOPT Version :9

Sequence 1:NP_572380.1 Gene:CG4607 / 31653 FlyBaseID:FBgn0029932 Length:525 Species:Drosophila melanogaster
Sequence 2:NP_011816.2 Gene:ARN2 / 856338 SGDID:S000001039 Length:620 Species:Saccharomyces cerevisiae


Alignment Length:578 Identity:103/578 - (17%)
Similarity:194/578 - (33%) Gaps:212/578 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 DTTKDSHAKEKPLGEGRLAVLRQELM-----------VFLG-----------NSGVLGSGMVVSM 65
            |::.....|:|..|...|.:.:.|||           :||.           :|.:.|:.|..:|
Yeast    34 DSSPRDEMKDKLKGTKSLIIRKSELMAKKYDTWQLKAIFLFSAFICTFAYGLDSSIRGTYMTYAM 98

  Fly    66 PAVTLNQLHDETQPFWLNKDESSW--FASIQNMACPLGGLLVSYFLDRIGRKHTILLTN------ 122
            .:.:.:.|........|.....|.  |..:.::...|...|||..|..:|   ||:.:.      
Yeast    99 NSYSAHSLISTVSVIVLMISAVSQVIFGGLSDIFGRLTLFLVSIVLYIVG---TIIQSQAYDVQR 160

  Fly   123 --------LIGLIGWILLVTSFMHSDRDMIYYQMLLGRCFGGIMIGMFVSPVGVYSAEISLPKIR 179
                    .:||:| ::|....|.||...:.:::.                   |:...|.|.|.
Yeast   161 YAAGAVFYYVGLVG-VMLQVVLMLSDNSSLKWRLF-------------------YTLIPSWPSII 205

  Fly   180 GRLILGTSLGLASGI------LLMYCLGYFIRHNIQLIFGISCCYQLAATLLVFPMPESPSWLLT 238
            ...:.|:.:..|:.:      :.|:.          .||.: ||..|...:|             
Yeast   206 TTWVSGSVVEAANPLENWSWNIAMWA----------FIFPL-CCIPLILCML------------- 246

  Fly   239 RGKEERARKSLRYFRGLPKKEVDYVPEFEAELAHMKELADASNTTAAGESLSQMIHRPEVYKPVL 303
                        :.|...:.:|::           |||.|..:                      
Yeast   247 ------------HMRWKVRNDVEW-----------KELQDEKS---------------------- 266

  Fly   304 MMTTFFGFQQACGVVVIIVYAVQIAQQAGVTIDPVLVAVML---GVARIITTLFMS-GIFEKWGR 364
                   :.|..|:|.::|       |....:|  :|.|:|   ||..|:..|.:: |:...|  
Yeast   267 -------YYQTHGLVQMLV-------QLFWKLD--VVGVLLFTAGVGCILVPLTLAGGVSTNW-- 313

  Fly   365 KPSGIFSATGMGACMLLLAGGNWFPDTLGTLHWLPVACIVAHIVFSTMGMLTLPFFMISEVFPQR 429
            :.|.|.....:|  .:|:.|..::...|..:.:.|...:....|::.:|::    |.|..|:...
Yeast   314 RNSKIIGPFVLG--FVLVPGFIYWESRLALVPFAPFKLLKDRGVWAPLGIM----FFICFVYQMA 372

  Fly   430 ARGSASGIAIFFGMILAFIMLKIYPNMEAALGTANLFAFYAGISFLAAAFIGVFVPETRGRTLEE 494
            |           |.:...:::.:..:..:|....||::|   ::.:.|.|:|:.|  ||...|:.
Yeast   373 A-----------GYLYTILVVAVDESASSATRIINLYSF---VTAVVAPFLGLIV--TRSSRLKS 421

  Fly   495 --------------LEERWQTGK--------------FSRRL----TIVNLKDVELHE 520
                          |..|:::|:              .|..|    |||:::.|..||
Yeast   422 YIIFGGSLYFITMGLFYRYRSGQDADGGIIAGMVIWGLSSCLFDYPTIVSIQSVTSHE 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4607NP_572380.1 MFS 55..484 CDD:119392 77/454 (17%)
SP 67..495 CDD:273317 78/467 (17%)
ARN2NP_011816.2 MFS_ARN_like 69..581 CDD:340880 95/543 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.