DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4607 and VBA1

DIOPT Version :9

Sequence 1:NP_572380.1 Gene:CG4607 / 31653 FlyBaseID:FBgn0029932 Length:525 Species:Drosophila melanogaster
Sequence 2:NP_013806.1 Gene:VBA1 / 855113 SGDID:S000004694 Length:562 Species:Saccharomyces cerevisiae


Alignment Length:626 Identity:121/626 - (19%)
Similarity:205/626 - (32%) Gaps:239/626 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 QEEQLVPPP--AYKPTVVAKDTTKDSHAKEKPLGEGRLAVLRQELMVFLGNSGVLGSGMVVSMPA 67
            :...|:|||  |..|.:            |:...|..||:.:..::..|.....| |.:..::.|
Yeast     6 ETSNLLPPPEEAEAPPL------------EQKFHEYNLALPKFPILFSLWLGSFL-SSLDSTIVA 57

  Fly    68 VTLNQLHDETQPFWLNKDESSWFAS---IQNMAC-PLGGLLVSYFLDRIGRKHTILLTNLIGLIG 128
            ..:|::.:|    :....:..|.|:   :.|.|. ||.|.|    .|..|||..:|.......:|
Yeast    58 NIMNRVAEE----FSESSKKQWIATSFLLTNTAFQPLYGKL----SDITGRKSALLTAQFFFGLG 114

  Fly   129 WILLVTSFMHSDRDMIYYQMLLGRCFGGI--MIGMFVSPV------GVYSAEISLPKIRGRLILG 185
              .|:|.|..:..:....:.:.|...||:  :..:.||.:      |||....::....|:| ||
Yeast   115 --CLLTCFARNVTEFSIARAICGIGAGGLNAISSIAVSDICTARERGVYQGYANIVFGFGQL-LG 176

  Fly   186 TSLGLASGILLMYCLGYFIRH-NIQLIFGISCCYQLAATLLVFPMPESPSWLLTRGKEERARKSL 249
            ..||           |.||.. ..:.:|||.....:..::|                   |.|::
Yeast   177 APLG-----------GVFIETIGWRALFGIQVPVIMLCSVL-------------------AIKNI 211

  Fly   250 RYFRGLPKKEVDYVPEFEAELAHMKELADASNTTAAGESLSQMIHRPEVYKPVLMMTTFFGFQQA 314
            ..       ::.:||.       |||.....|           :.|.:::..:.::.|..|....
Yeast   212 NI-------KLFHVPP-------MKERYTLKN-----------LSRIDIFGSLSLVATISGVLFL 251

  Fly   315 CG----------------VVVIIV---YAVQ-----------IAQQAGVTI------------DP 337
            |.                :|.|:|   ||.:           ....:.||:            .|
Yeast   252 CSSQLNKLYLALFTIGSFIVFILVERYYATEKILPFELLTRSFCLSSAVTVISSFVVFGEIFRSP 316

  Fly   338 VLVAVMLGVARIITTLFMSGIFEKWGRKPSGIFSATGMGACMLLLAGGNWFPDTLGTLHW----- 397
            :.:.::..::...|.||:  ||      || |..|.|.     |:.|            |     
Yeast   317 IYLQLLQNISVTKTGLFL--IF------PS-ISVAVGS-----LVTG------------WVLRNT 355

  Fly   398 -LPVACIVAHIVFSTMGM----LTLPFFMISEVFPQRARGSASGIAIFFGMILAFIMLKIYPNME 457
             :.:|.....|:|..|.|    |.|.:|::|.:.|.                     ..||..:|
Yeast   356 KINLAHCAYQIIFGGMIMQLLGLGLGYFLLSHLNPD---------------------YTIYDMLE 399

  Fly   458 AALGTAN-----LFAFYAG--ISF-----LAAAFIGVFVPETRGRTLEELEERWQTGKF------ 504
            :....:|     |...:|.  :||     |.|..:.:..      |:|:.::...||.|      
Yeast   400 SITFRSNSIWWKLIYVFASVLVSFGYACLLVATLVSIVF------TVEKSQQGTMTGVFYLWRSI 458

  Fly   505 ----SRRLTIVNL----------------KDVELHEVFLKK 525
                ...||:|:.                :|.|.|  |.||
Yeast   459 GNVLGASLTLVSYENSLSSMLWNYMFKTKRDDEYH--FTKK 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4607NP_572380.1 MFS 55..484 CDD:119392 96/505 (19%)
SP 67..495 CDD:273317 96/504 (19%)
VBA1NP_013806.1 MFS_Azr1_MDR_like 42..469 CDD:341045 104/546 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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