DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4607 and AMF1

DIOPT Version :9

Sequence 1:NP_572380.1 Gene:CG4607 / 31653 FlyBaseID:FBgn0029932 Length:525 Species:Drosophila melanogaster
Sequence 2:NP_015023.1 Gene:AMF1 / 854560 SGDID:S000005905 Length:515 Species:Saccharomyces cerevisiae


Alignment Length:581 Identity:119/581 - (20%)
Similarity:188/581 - (32%) Gaps:184/581 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 DTTKDSHAKE-KPLGEGRLAVLRQELMV----FLGNSGVLGSGMVVSMPAV--TLNQLHDETQPF 80
            ||..::..|| |.|.|..:...|.:.::    |:   |||.|..:::...:  :|..||.....|
Yeast    13 DTNAEALKKEDKVLSEFDIQDERPKSLLWESAFV---GVLCSAQLMTQAGLGQSLAPLHIIGNSF 74

  Fly    81 -WLNKDESSWFASIQNMACPLGGLLVSYFLDRIGRKHTILLTNLIGLIGWILLVTSFMHSDRDMI 144
             ..|..:.|||||..::......|:.....|..|.|...:| .......|.||....::|::  |
Yeast    75 GTTNAGQLSWFASAYSLTVGTFILIAGRLGDIFGHKKFFVL-GFFWYALWSLLAGFSVYSNQ--I 136

  Fly   145 YYQMLLGRCFGGI-----------MIGMFVSP-------VGVYSAEISLPKIRGRLILGTSLGLA 191
            ::...  |.|.|:           ::|....|       ..::.|  |.|   |...||......
Yeast   137 FFDCC--RAFQGMGPAFLLPNAIAILGRTYKPGRRKNMVFSLFGA--SAP---GGFFLGAVFSSM 194

  Fly   192 SGILLMYCLGYFIRHNIQLIFGISCCYQLAATLLVFPMPESPSWLLTRGKEERARKSLRYFRGLP 256
            .|.|..:...|:       |.||:|.....|...|.|....||         |...|.:..    
Yeast   195 LGQLAWWPWAYW-------IMGIACFVLAVAGYFVIPHTPMPS---------RDASSFKLL---- 239

  Fly   257 KKEVDYVPEFEAELAHMKELADASNTTAAGESLSQMI---------HRPEVYKPVLMMTTFFGFQ 312
             :.:|:.               .|.|...|..|....         ..|..| .:|::.|||   
Yeast   240 -ERIDFA---------------GSVTGVVGLILFNFAWNQGPVVGWQTPYTY-ALLIVGTFF--- 284

  Fly   313 QACGVVVIIVY-----AVQIAQQAGVTIDP--VLVAVMLGVARIITTLFMSGIFEKW-------G 363
                 :||..|     |..:...|.::.|.  ||..:..|.|.     |...||..|       |
Yeast   285 -----LVIFAYIESRAAFPLLPFAALSSDTAFVLSCIAAGWAS-----FGIWIFYTWQFMEDSRG 339

  Fly   364 RKP---SGIFSATGM-GACMLLLAG---GNWFPD----------TLGTL----------HWLPVA 401
            :.|   |..||...: |.|..:..|   .:..|.          |:||:          :|   |
Yeast   340 QTPLLSSAQFSPVAISGFCAAVTTGFLLSHTPPSTVMLFAMTAFTVGTILIATAPVHQTYW---A 401

  Fly   402 CIVAHIVFSTMGM-LTLP--FFMISEVFPQRARGSASGIAIFFGMILAFIMLKIYPNMEAALGTA 463
            .....|:....|| ::.|  ..|:|:..|...:|.|:.:          :...:..::...||.|
Yeast   402 QTFVSIIVMPWGMDMSFPAATIMLSDSMPHEHQGLAASL----------VNTVVNYSISIGLGIA 456

  Fly   464 NLF-----------------AFYAGISFLAAAFIGVFVPETRGRTLEELEERWQTGKFSRR 507
            ...                 ::|.||..   :.:|:||..|..         |.|...|::
Yeast   457 GTIESRVNDGGAKPLKGYRCSWYMGIGL---SGLGIFVAATYA---------WSTFMKSKK 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4607NP_572380.1 MFS 55..484 CDD:119392 104/519 (20%)
SP 67..495 CDD:273317 103/518 (20%)
AMF1NP_015023.1 MFS_Amf1_MDR_like 48..493 CDD:341029 105/520 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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