DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4607 and SGB1

DIOPT Version :9

Sequence 1:NP_572380.1 Gene:CG4607 / 31653 FlyBaseID:FBgn0029932 Length:525 Species:Drosophila melanogaster
Sequence 2:NP_178100.3 Gene:SGB1 / 844321 AraportID:AT1G79820 Length:495 Species:Arabidopsis thaliana


Alignment Length:533 Identity:131/533 - (24%)
Similarity:211/533 - (39%) Gaps:93/533 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKGQQEEQLVPPPAY------------KPTVVAKDTTKDSHAKEKP----------LGEGRLAVL 43
            |:|:..::.||...:            .||...||....|..:..|          |....|.|:
plant    11 MRGRHIDKRVPSKEFLSALDKAETAVRLPTGTGKDCGNPSWKRSLPHVLVASLTSLLFGYHLGVV 75

  Fly    44 RQEL---MVFLGNSG-VLGSGMVVSMPAVTLNQLHDETQPFWLNKDESSWFASIQNMACPLGGLL 104
            .:.|   .:.||.|| .:..|:|||                                .|..|..:
plant    76 NETLESISIDLGFSGNTIAEGLVVS--------------------------------TCLGGAFI 108

  Fly   105 VSYF----LDRIGRKHTILLTNLIGLIGWILLVTSFMHSDRDMIYYQMLLGRCFGGIMIGMFVSP 165
            .|.|    .|.:||:....|:.|..::|     .|...|...::  .|||||...||.:|:..|.
plant   109 GSLFSGLVADGVGRRRAFQLSALPMIVG-----ASVSASTESLM--GMLLGRFLVGIGMGIGPSV 166

  Fly   166 VGVYSAEISLPKIRGRLILGTSLGLASGILLMYCLGYFIRHNI---QLIFGISCCYQLAATLLVF 227
            ..:|..|:|...:||.....|.:....|:|.....|...:.|:   ::.|.||..  .||.|.||
plant   167 TALYVTEVSPAYVRGTYGSSTQIATCIGLLGSLFAGIPAKDNLGWWRICFWISTV--PAAMLAVF 229

  Fly   228 P--MPESPSWLLTRGKEERARKSLRYFRGLPKKEVDYVPEFEAELAHMKELADASNTTAAGESLS 290
            .  ..|||.||..||:...|........|     ..||....|||.......||.:.     .||
plant   230 MELCVESPQWLFKRGRAAEAEAVFEKLLG-----GSYVKAAMAELVKSDRGDDADSA-----KLS 284

  Fly   291 QMIHRPEVYKPVLMMTTFFGFQQACGVVVIIVYAVQIAQQAGVTIDPVLVA-VMLGVARIITTLF 354
            :::. ...::.|.:.:|.|..||..|:..:..::..:.::|||   |...| :.:||..::.:..
plant   285 ELLF-GRSFRVVFIGSTLFALQQLSGINAVFYFSSTVFKKAGV---PSASANICVGVCNLLGSTV 345

  Fly   355 MSGIFEKWGRKPSGIFSATGMGACMLLLA-GGNWFPDTLGTLHWLPVACIVAHIVFSTMGMLTLP 418
            ...:.:|.|||...|.|..||...:.|.| .....|...||| :|.|..::..::....|...:|
plant   346 AVVLMDKLGRKVLLIGSFAGMAVSLGLQAIAYTSLPSPFGTL-FLSVGGMLLFVLSFATGAGPVP 409

  Fly   419 FFMISEVFPQRARGSASGIAIFFGMILAFIMLKIYPNMEAALGTANLFAFYAGISFLAAAFIGVF 483
            ..::||:.|.|.|.:|..:.:....::.|.:..::..|...||:..|.|.:.....:|..|:...
plant   410 SLLLSEICPGRLRATALAVCLAVHWVINFFVGLLFLRMLEQLGSVLLNAIFGFFCVVAVIFVQKN 474

  Fly   484 VPETRGRTLEELE 496
            |.||:|::|:|:|
plant   475 VVETKGKSLQEIE 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4607NP_572380.1 MFS 55..484 CDD:119392 107/440 (24%)
SP 67..495 CDD:273317 107/438 (24%)
SGB1NP_178100.3 MFS_GLUT_like 60..477 CDD:340873 115/472 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.