DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4607 and TMT1

DIOPT Version :9

Sequence 1:NP_572380.1 Gene:CG4607 / 31653 FlyBaseID:FBgn0029932 Length:525 Species:Drosophila melanogaster
Sequence 2:NP_001319055.1 Gene:TMT1 / 838676 AraportID:AT1G20840 Length:734 Species:Arabidopsis thaliana


Alignment Length:713 Identity:123/713 - (17%)
Similarity:218/713 - (30%) Gaps:312/713 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 WLNKDESSWFASIQNMACPLGGLLVSYFL--------------DRIGRKHTILLTNLIGLI-GWI 130
            ::|||        .|:...:.||:|:..|              |.:||:..::|::::..: |.|
plant    31 YINKD--------LNLPTSVQGLVVAMSLIGATVITTCSGPISDWLGRRPMLILSSVMYFVCGLI 87

  Fly   131 LLVTSFMHSDRDMIYYQMLLGRCFGGIMIGMFVSPVGVYSAEISLPKIRGRL-ILGTSLGLASGI 194
            :|.:..:        |.:...|...|...|:.|:.|.||.:|.:.|:|||:| .|...|| :.|:
plant    88 MLWSPNV--------YVLCFARLLNGFGAGLAVTLVPVYISETAPPEIRGQLNTLPQFLG-SGGM 143

  Fly   195 LLMYCLGYFI----RHNIQLIFGI-SCCYQLAATLLVFPMPESPSWLLTRGKEERARKSLRYFRG 254
            .|.||:.:.:    ..:.:.:.|: |....|...|.||.:||||.||:::|:.:.|::.|:...|
plant   144 FLSYCMVFTMSLSDSPSWRAMLGVLSIPSLLYLFLTVFYLPESPRWLVSKGRMDEAKRVLQQLCG 208

  Fly   255 -----------------------------LPKKEVD----------------------Y----VP 264
                                         |...|.|                      |    ||
plant   209 REDVTDEMALLVEGLDIGGEKTMEDLLVTLEDHEGDDTLETVDEDGQMRLYGTHENQSYLARPVP 273

  Fly   265 EFEAELA--------------------------HMK---------------------ELADASN- 281
            |..:.|.                          |.|                     ..|||.: 
plant   274 EQNSSLGLRSRHGSLANQSMILKDPLVNLFGSLHEKMPEAGGNTRSGIFPHFGSMFSTTADAPHG 338

  Fly   282 --------------------------------------------TTA----------AGESLSQM 292
                                                        ||:          :|.:||..
plant   339 KPAHWEKDIESHYNKDNDDYATDDGAGDDDDSDNDLRSPLMSRQTTSMDKDMIPHPTSGSTLSMR 403

  Fly   293 IHR---------------------------------------------------PE-----VYKP 301
            .|.                                                   |:     ::..
plant   404 RHSTLMQGNGESSMGIGGGWHMGYRYENDEYKRYYLKEDGAESRRGSIISIPGGPDGGGSYIHAS 468

  Fly   302 VLMMTTFFG------------------------------------------FQQACGVVVIIVYA 324
            .|:..:..|                                          .||..|:..::.|.
plant   469 ALVSRSVLGPKSVHGSAMVPPEKIAASGPLWSALLEPGVKRALVVGVGIQILQQFSGINGVLYYT 533

  Fly   325 VQIAQQAGVTIDPVLVAVMLGVARIITTLFMSG---------------IFEKWGRKPSGIFSATG 374
            .||.::|||.|    :...||::.|..:..:||               :.:..||:...:::...
plant   534 PQILERAGVDI----LLSSLGLSSISASFLISGLTTLLMLPAIVVAMRLMDVSGRRSLLLWTIPV 594

  Fly   375 MGACMLLLAGGNWFPDTLGTLHWLPVACIVAHIVFSTMGMLTLPFFMISEVFPQRARGSASGIAI 439
            :...:::|........:......|...|:|.:..|..||...:|..:.||:||.|.||....|..
plant   595 LIVSLVVLVISELIHISKVVNAALSTGCVVLYFCFFVMGYGPIPNILCSEIFPTRVRGLCIAICA 659

  Fly   440 FFGMILAFIMLKIYPNMEAALGTANLFAFYAGISFLAAAFIGVFVPETRGRTLEELEERWQTG 502
            ....|...|:....|.:.:::|...:|:.||.:..::..|:.:.||||:|..||.:.:.:..|
plant   660 MVFWIGDIIVTYSLPVLLSSIGLVGVFSIYAAVCVISWIFVYMKVPETKGMPLEVITDYFAFG 722

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4607NP_572380.1 MFS 55..484 CDD:119392 115/693 (17%)
SP 67..495 CDD:273317 122/704 (17%)
TMT1NP_001319055.1 MFS 10..>208 CDD:421695 51/193 (26%)
MFS <509..706 CDD:421695 42/200 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48021
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.000

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