DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4607 and MSS1

DIOPT Version :9

Sequence 1:NP_572380.1 Gene:CG4607 / 31653 FlyBaseID:FBgn0029932 Length:525 Species:Drosophila melanogaster
Sequence 2:NP_198006.1 Gene:MSS1 / 832703 AraportID:AT5G26340 Length:526 Species:Arabidopsis thaliana


Alignment Length:517 Identity:122/517 - (23%)
Similarity:203/517 - (39%) Gaps:89/517 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 MVFLGNSGVLGSGMVVSMPAVTLNQLHDETQPFW--------LNKDESSWFASIQNMACP----- 99
            ::|..:.||  ||.|.|||        |..:.|:        ...|:.|.:....|....     
plant    35 LMFGYDVGV--SGGVTSMP--------DFLEKFFPVVYRKVVAGADKDSNYCKYDNQGLQLFTSS 89

  Fly   100 --LGGLLVSYFLD----RIGRKHTILLTNLIGLIGWILLVTSFMHSDRDMIYYQMLLGRCFGGIM 158
              |.||..::|..    .:||:.|:|:..:..:||..|...:     :|:.  .::.||...|..
plant    90 LYLAGLTATFFASYTTRTLGRRLTMLIAGVFFIIGVALNAGA-----QDLA--MLIAGRILLGCG 147

  Fly   159 IGMFVSPVGVYSAEISLPKIRGRLILGTSLGLASGILLMYCLGYFIRH-----NIQLIFGISCCY 218
            :|.....|.::.:||:..:|||.|.:...|.:..|||....:.|....     ..:|..|::...
plant   148 VGFANQAVPLFLSEIAPTRIRGGLNILFQLNVTIGILFANLVNYGTAKIKGGWGWRLSLGLAGIP 212

  Fly   219 QLAATLLVFPMPESPSWLLTRGKEERARKSLRYFRGLPKKEVDYVPEFEAELAHMKELADASNTT 283
            .|..|:....:.|:|:.|:.||:.:..:..||..||....|    ||| |:|.....|  |....
plant   213 ALLLTVGALLVTETPNSLVERGRLDEGKAVLRRIRGTDNVE----PEF-ADLLEASRL--AKEVK 270

  Fly   284 AAGESLSQMIHRPEVYKPVLMMTTFFGFQQACGVVVIIVYAVQIAQQAGVTIDPVLV-AVMLGVA 347
            ....:|.|..:||::...|.:..    |||..|:..|:.||..:....|...|..|. ||:.|..
plant   271 HPFRNLLQRRNRPQLVIAVALQI----FQQCTGINAIMFYAPVLFSTLGFGSDASLYSAVVTGAV 331

  Fly   348 RIITTLFMSGIFEKWGRKPSGIFSATGMGACMLLLAGGNWF--------------PDTLGTLH-- 396
            .:::||......:|.||:            .:||.||...|              .||...|.  
plant   332 NVLSTLVSIYSVDKVGRR------------VLLLEAGVQMFFSQVVIAIILGVKVTDTSTNLSKG 384

  Fly   397 --WLPVACIVAHIVFSTMGMLTLPFFMISEVFPQRARGSASGIAIFFGMILAFIMLKIYPNMEAA 459
              .|.|..|..::.........|.:.:.||.||...|.:...:.:...::..||:.:.:.:|...
plant   385 FAILVVVMICTYVAAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFIIAQAFLSMLCH 449

  Fly   460 LGTANLFAFYAGISFLAAAFIGVFVPETRGRTLEELEER-WQTGKFSRRLTIVNLKDVELHE 520
            . ...:|.|::....:.:.|:...:|||:...:||:.|| |:...|..|.    :.|...||
plant   450 F-KFGIFIFFSAWVLIMSVFVMFLLPETKNIPIEEMTERVWKKHWFWARF----MDDHNDHE 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4607NP_572380.1 MFS 55..484 CDD:119392 108/471 (23%)
SP 67..495 CDD:273317 104/470 (22%)
MSS1NP_198006.1 MFS_STP 29..475 CDD:340919 109/480 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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