DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4607 and TMT2

DIOPT Version :9

Sequence 1:NP_572380.1 Gene:CG4607 / 31653 FlyBaseID:FBgn0029932 Length:525 Species:Drosophila melanogaster
Sequence 2:NP_001190923.1 Gene:TMT2 / 829684 AraportID:AT4G35300 Length:739 Species:Arabidopsis thaliana


Alignment Length:712 Identity:121/712 - (16%)
Similarity:203/712 - (28%) Gaps:339/712 - (47%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 GLLVSYFL--------------DRIGRKHTILLTNLIGLIGWILLVTSFMHSDRDMIYYQMLLGR 152
            ||:|:..|              |.:||:..::|::::..:|.::::.|       ...|.:||||
plant    46 GLIVAMSLIGATLITTCSGGVADWLGRRPMLILSSILYFVGSLVMLWS-------PNVYVLLLGR 103

  Fly   153 CFGGIMIGMFVSPVGVYSAEISLPKIRGRLILGTSLGLASGILLMYCLGYFIRHNIQLIFGISC- 216
            ...|..:|:.|:.|.:|.:|.:.|:|||.|........:.|:.|.||          ::||:|. 
plant   104 LLDGFGVGLVVTLVPIYISETAPPEIRGLLNTLPQFTGSGGMFLSYC----------MVFGMSLM 158

  Fly   217 ---CYQLAATLL-----------VFPMPESPSWLLTRGKEERARKSLRYFRGL------------ 255
               .::|...:|           ||.:||||.||:::|:...|::.|:..||.            
plant   159 PSPSWRLMLGVLFIPSLVFFFLTVFFLPESPRWLVSKGRMLEAKRVLQRLRGREDVSGEMALLVE 223

  Fly   256 ----------------PKKEV----------DYVPEFEAE------------------------- 269
                            |..||          |.:..:.||                         
plant   224 GLGIGGETTIEEYIIGPADEVTDDHDIAVDKDQIKLYGAEEGLSWVARPVKGGSTMSVLSRHGST 288

  Fly   270 -----------------LAHMK----------------------------ELADASNTTAAGE-- 287
                             ..|.|                            |..|..|....||  
plant   289 MSRRQGSLIDPLVTLFGSVHEKMPDTGSMRSALFPHFGSMFSVGGNQPRHEDWDEENLVGEGEDY 353

  Fly   288 ----------------------------------------------------------------- 287
                                                                             
plant   354 PSDHGDDSEDDLHSPLISRQTTSMEKDMPHTAHGTLSTFRHGSQVQGAQGEGAGSMGIGGGWQVA 418

  Fly   288 --------------------------------------------------SLSQMIHRPEVYKPV 302
                                                              ..|.::.:|.:|...
plant   419 WKWTEREDESGQKEGGFKRIYLHQEGFPGSRRGSIVSLPGGDGTGEADFVQASALVSQPALYSKD 483

  Fly   303 LMMTTFFG-----------------------------------FQQACGVVVIIVYAVQIAQQAG 332
            |:.....|                                   .||..|:..::.|..||.:|||
plant   484 LLKEHTIGPAMVHPSETTKGSIWHDLHDPGVKRALVVGVGLQILQQFSGINGVLYYTPQILEQAG 548

  Fly   333 VTIDPVLVAVMLGVARIITTLFMSG---------------IFEKWGRKPSGIFSATGMGACMLLL 382
            |.|   |::.| |::....:|.:|.               :.:..||:...:.:...:.|.:|:|
plant   549 VGI---LLSNM-GISSSSASLLISALTTFVMLPAIAVAMRLMDLSGRRTLLLTTIPILIASLLVL 609

  Fly   383 AGGNWFPDTLGTLHW-------LPVACIVAHIVFSTMGMLTLPFFMISEVFPQRARGSASGIAIF 440
            ...|       .:|.       |....:|.:..|..||....|..:.||:||.|.||....|...
plant   610 VISN-------LVHMNSIVHAVLSTVSVVLYFCFFVMGFGPAPNILCSEIFPTRVRGICIAICAL 667

  Fly   441 FGMILAFIMLKIYPNMEAALGTANLFAFYAGISFLAAAFIGVFVPETRGRTLEELEERWQTG 502
            ...|...|:....|.:..::|.|.:|..||.:..::..|:.:.||||:|..||.:.|.:..|
plant   668 TFWICDIIVTYSLPVLLKSIGLAGVFGMYAIVCCISWVFVFIKVPETKGMPLEVITEFFSVG 729

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4607NP_572380.1 MFS 55..484 CDD:119392 112/692 (16%)
SP 67..495 CDD:273317 119/703 (17%)
TMT2NP_001190923.1 MFS 14..>174 CDD:421695 35/144 (24%)
MFS <516..713 CDD:421695 47/207 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48021
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.000

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