DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4607 and AT3G05155

DIOPT Version :9

Sequence 1:NP_572380.1 Gene:CG4607 / 31653 FlyBaseID:FBgn0029932 Length:525 Species:Drosophila melanogaster
Sequence 2:NP_001319476.1 Gene:AT3G05155 / 819678 AraportID:AT3G05155 Length:459 Species:Arabidopsis thaliana


Alignment Length:499 Identity:133/499 - (26%)
Similarity:212/499 - (42%) Gaps:88/499 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 EGRLAVLRQE---------LMVFLGNSGVLGSGMVVSMPAVTLNQLHDETQPFWLNKDESSWFAS 92
            :|.|.:.::|         ...|:..|.....|:.:...|.|:..:.::..   |:..:.|.|.|
plant    10 KGLLLIRKEESANTTPFLVFTTFIIVSASFSFGVALGHTAGTMASIMEDLD---LSITQFSVFGS 71

  Fly    93 IQNMACPLGGLLVSYFLDRIGRKHTILLTNLIGLIGWILLVTSFMHSDRDMIYYQMLLGRCFGGI 157
            :......:|.|..:...|..|.|.|:.:|.:..:.||:.:..:     :::|:..  |||.|.||
plant    72 LLTFGGMIGALFSATIADSFGCKMTLWITEVFCISGWLAIALA-----KNIIWLD--LGRFFVGI 129

  Fly   158 MIGMFVSPVGVYSAEISLPKIRGRLILGTSLGLASGILLMYCLGYFIRHNIQLIFGI-SCCYQLA 221
            .:|:....|.||.|||:...:||.......|....|:...|.||.|:...|..:.|| .|..||.
plant   130 GVGLLSYVVPVYIAEITPKTVRGTFTFSNQLLQNCGVATAYYLGNFMSWRIIALIGILPCLIQLV 194

  Fly   222 ATLLVFPMPESPSWLLTRGKEERARKSLRYFRGLPKKEVDYVPEFEAELAHMKELADASNTTAAG 286
            .   :|.:||||.||...|::|.....|:..||   .|.|.|.|.:..|..::        .:|.
plant   195 G---LFFVPESPRWLAKEGRDEECEVVLQKLRG---DEADIVKETQEILISVE--------ASAN 245

  Fly   287 ESLSQMIHRPEVYKPVLMMTTFFG---FQQACGVVVIIVYAVQIAQQA------GVTIDPVLVAV 342
            .|:..:..:...::    :|...|   .||..|...:..|...:...|      |:|:..::|  
plant   246 ISMRSLFKKKYTHQ----LTIGIGLMLLQQLSGSAGLGYYTGSVFDLAGFPSRIGMTVLSIVV-- 304

  Fly   343 MLGVARIITTLFMSGIFEKWGRKPSGIFSATG--MGACMLLLAGG---------NWFPDTLGTLH 396
               |.:.|..|.   :.|:|||:|..:.||.|  :|...|.||.|         |..|    ||.
plant   305 ---VPKAILGLI---LVERWGRRPLLMASAFGLCLGCISLALAFGLKGVPGVNVNVTP----TLA 359

  Fly   397 WLPVACIVAHIVFSTMGMLTLPFFMISEVFPQRAR---GSASGIAIFF-GMILAF---IMLKIYP 454
            ::.   |:..::....|:..||:.::||:||...:   ||...|..:| |.|:::   .||...|
plant   360 FIG---IMTFVMMFAAGLGALPWIIMSEIFPMDMKVVAGSLVSITNWFTGWIVSYCFNFMLLWSP 421

  Fly   455 NMEAALGTANLFAFYAGISFLAAAFIGVFVPETRGRTLEELEER 498
            .     ||   |..:|.||.....|....||||||.||||::.|
plant   422 T-----GT---FIIFATISGATVVFAWCLVPETRGLTLEEIQRR 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4607NP_572380.1 MFS 55..484 CDD:119392 117/456 (26%)
SP 67..495 CDD:273317 125/455 (27%)
AT3G05155NP_001319476.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48021
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

Return to query results.
Submit another query.