DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4607 and INT3

DIOPT Version :9

Sequence 1:NP_572380.1 Gene:CG4607 / 31653 FlyBaseID:FBgn0029932 Length:525 Species:Drosophila melanogaster
Sequence 2:NP_181117.1 Gene:INT3 / 818146 AraportID:AT2G35740 Length:580 Species:Arabidopsis thaliana


Alignment Length:571 Identity:125/571 - (21%)
Similarity:228/571 - (39%) Gaps:144/571 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 VLRQELMVFLG------NSGVLGSGMVVSMPAVTLNQLHDETQPFWLNKDESSW----FASIQNM 96
            ::|..|...:|      |:||:...::.      :.:...|.       |..:|    ..|:...
plant    26 IMRLALSAGIGGLLFGYNTGVIAGALLY------IKEEFGEV-------DNKTWLQEIIVSMTVA 77

  Fly    97 ACPLGGLLVSYFLDRIGRKHTILLTNLIGLIGWILLVTSFMHSDRDMIYYQMLLGRCFGGIMIGM 161
            ...:|..:..::.|:.||:.::|:.:::.|:|.:::|.:  |:.     :.::|||...|..:||
plant    78 GAIVGAAIGGWYNDKFGRRMSVLIADVLFLLGALVMVIA--HAP-----WVIILGRLLVGFGVGM 135

  Fly   162 FVSPVGVYSAEISLPKIRGRLILGTSLGLASGILLMYCLGYFIRH---NIQLIFGISCCYQLAAT 223
            ......:|.:|:|..:|||.|:....|.:..|..|.|.:.....|   ..:.:.|:|....:...
plant   136 ASMTSPLYISEMSPARIRGALVSTNGLLITGGQFLSYLINLAFVHTPGTWRWMLGVSAIPAIIQF 200

  Fly   224 LLVFPMPESPSWLLTRGKEERARKSLRYFRGLPKKEVDYVPEFEAELAHMKE--LADASNTTAAG 286
            .|:..:||||.||....::..:|..|.  |..|.:.|      |||:|.:||  .|:.::....|
plant   201 CLMLTLPESPRWLYRNDRKAESRDILE--RIYPAEMV------EAEIAALKESVRAETADEDIIG 257

  Fly   287 ESLSQMIHRPEVYKPVLMMTTFFGF-----QQACGVVVIIVYAVQIAQQAGVTIDPVLVAVML-- 344
            .:.|..: |..:..||:......|.     ||..|:..::.|:..|.|.||...:...:|:.|  
plant   258 HTFSDKL-RGALSNPVVRHGLAAGITVQVAQQFVGINTVMYYSPTILQFAGYASNKTAMALALIT 321

  Fly   345 ----GVARIITTLFMSGIFEKWGRKPSGIFSATGMGACMLLLAG--------------------- 384
                .|..:::.:|:    :::||:...|.|..|:..|:::||.                     
plant   322 SGLNAVGSVVSMMFV----DRYGRRKLMIISMFGIITCLVILAAVFNEASNHAPKIDKRDSRNFA 382

  Fly   385 ------------------GNW-----------FPDTLGTLHWLPVACIV---------------- 404
                              .||           |... |...:.|.||||                
plant   383 KNATCPAFAPFTASRSPPSNWNCMKCLQYDCGFCSN-GAQEYAPGACIVQSADMKALCHSKGRTF 446

  Fly   405 ------------------AHIVFSTMGMLTLPFFMISEVFPQRARGSASGIAIFFGMILAFIMLK 451
                              .:|:....||.|:|:.:.||::|.|.||.|.|||.....:...::.:
plant   447 FKDGCPSKFGYLAIVFLGLYIIVYAPGMGTVPWIVNSEIYPLRYRGLAGGIAAVSNWMSNLVVSE 511

  Fly   452 IYPNMEAALGTANLFAFYAGISFLAAAFIGVFVPETRGRTLEELEERWQTG 502
            .:..:..|:|::..|..:||.|.:...||.:.||||:|...||:|:..:.|
plant   512 TFLTLTNAVGSSGTFLLFAGSSAVGLFFIWLLVPETKGLQFEEVEKLLEGG 562

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4607NP_572380.1 MFS 55..484 CDD:119392 112/532 (21%)
SP 67..495 CDD:273317 116/531 (22%)
INT3NP_181117.1 SP 1..555 CDD:273317 122/562 (22%)
MFS 31..>364 CDD:119392 83/365 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X729
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

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