DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4607 and CG10960

DIOPT Version :9

Sequence 1:NP_572380.1 Gene:CG4607 / 31653 FlyBaseID:FBgn0029932 Length:525 Species:Drosophila melanogaster
Sequence 2:NP_648605.1 Gene:CG10960 / 39458 FlyBaseID:FBgn0036316 Length:539 Species:Drosophila melanogaster


Alignment Length:529 Identity:144/529 - (27%)
Similarity:243/529 - (45%) Gaps:102/529 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 VVAKD---TTKDSHAKEKPLGEGRLAVLRQELMVFLGNS-----------------GVLGSGMVV 63
            |.|.|   |:...|.:|..||.          ||....|                 |...:|.|:
  Fly    47 VKASDNGRTSSTPHDQENLLGN----------MVHTSTSNNSQKWPQYVAALAAAGGAFAAGTVL 101

  Fly    64 --SMPAVTLNQLHDETQPFWLNKDESSWFASIQNM--AC---PLGGLLVSYFLDRIGRKHTILLT 121
              :.||.|......|...|.::||:.||..|...:  ||   |:|     :.::.||||.|:|..
  Fly   102 GWTSPAETEIVDRGEGYDFPVDKDQFSWVGSAMTLGAACVCIPIG-----FLINMIGRKWTMLFL 161

  Fly   122 NLIGLIGWILLV----TSFMHSDRDMIYYQMLLGRCFGGIMIGMFVSPVGVYSAEISLPKIRGRL 182
            .|..::||.:|:    .|.:::.|.::           ||..|.|.....:|:.||:..:|||.|
  Fly   162 VLPFILGWTMLIWAVNVSMLYASRFIL-----------GIAGGAFCVTAPMYTGEIAQKEIRGTL 215

  Fly   183 ILGTSLGLASGILLMYCLGYFIR--------HNIQLIFGISCCYQLAATLLVFPMPESPSWLLTR 239
            .....|.:..|||.:|.:|..::        ..:.||||          .:.|.|||||::|:::
  Fly   216 GSFFQLMITIGILFVYAVGAGVKIFWLSIICGILPLIFG----------AIFFFMPESPTYLVSK 270

  Fly   240 GKEERARKSLRYFRGLPKKEVDYVPEFEAELAHMKEL-----ADASNTTAAGESLSQMIHRPEVY 299
            .:.|.|.||:::.||   ||.||.|    |||.::|.     |:..|..||       ::||...
  Fly   271 DRSENAIKSIQWLRG---KEYDYEP----ELAELRETDRETKANKVNVWAA-------LNRPVTR 321

  Fly   300 KPVLMMTTFFGFQQACGVVVIIVYAVQIAQQAGVTIDPVLVAVMLGVARIITTLFMSGIFEKWGR 364
            |.:.:......|||.||:..:|.||.:|..:|...|:.....:::|:.:::.|...:.:.:|.||
  Fly   322 KALAISMGLMFFQQVCGINAVIFYASRIFLEANTGIEAEWATILIGIMQVVATFVSTLVVDKLGR 386

  Fly   365 KPSGIFSATGMGACMLLLAGGNWF------PDTLGTLHWLPVACIVAHIVFSTMGMLTLPFFMIS 423
            :.  :..|:|:...:...|.|.:|      ...:.:|.|||||.:...|:..::|...:|:.|:.
  Fly   387 RI--LLLASGISMAISTTAIGVYFFLQKQDAAQVVSLGWLPVASLCLFIIMFSIGYGPVPWLMMG 449

  Fly   424 EVFPQRARGSASGIAIFFGMILAFIMLKIYPNMEAALGTANLFAFYAGISFLAAAFIGVFVPETR 488
            |:|....:|.|..:|.....:|||::.|.:.|:...||....|..:||::.:...|:...||||:
  Fly   450 ELFATDIKGFAGSLAGTSNWLLAFVVTKTFVNLNDGLGIGGTFWLFAGLTVVGVIFVYFAVPETK 514

  Fly   489 GRTLEELEE 497
            |::|.|:::
  Fly   515 GKSLNEIQQ 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4607NP_572380.1 MFS 55..484 CDD:119392 126/458 (28%)
SP 67..495 CDD:273317 128/455 (28%)
CG10960NP_648605.1 MFS_1 117..474 CDD:284993 110/398 (28%)
MFS 118..508 CDD:119392 119/431 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45444342
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR48021
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

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