DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4607 and slc2a12

DIOPT Version :9

Sequence 1:NP_572380.1 Gene:CG4607 / 31653 FlyBaseID:FBgn0029932 Length:525 Species:Drosophila melanogaster
Sequence 2:NP_956832.1 Gene:slc2a12 / 393510 ZFINID:ZDB-GENE-040426-1513 Length:610 Species:Danio rerio


Alignment Length:626 Identity:140/626 - (22%)
Similarity:240/626 - (38%) Gaps:187/626 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 QQEEQLVPPPAYKPTVVAKDTTKDSHAKEKP---LGEGRLAVLRQELMVFLGNSGVLGSGMVVSM 65
            ::..::...|..|..|...||  ..|.::.|   .|.||..||....:..|  ||:| .|..:|:
Zfish     5 EESIRMTSDPQSKIYVQNPDT--HIHLEQSPSAKSGNGRALVLCSVSVACL--SGLL-MGYEMSL 64

  Fly    66 PAVTLNQLHDETQPFWLNKDESSWFASIQNMACP-----LGGLLVSYF---------LDRIGRKH 116
            .:..|.||.|                 :..::||     :|.||:..|         ||..||:.
Zfish    65 ISGALLQLRD-----------------VLTLSCPEQEQVVGSLLLGAFLLSLGGGTILDHYGRRF 112

  Fly   117 TILLTNLIGLIGWIL--LVTSFMHSDRDMIYYQMLLGRCFGGIMIGMFVSPVG----VYSAEISL 175
            ||:||.|:.::|.:|  .|.||         :.:::||    :::||.|:..|    :|:||::.
Zfish   113 TIILTALLCVLGTLLSVCVVSF---------WALVVGR----MLVGMSVALSGTASCLYAAEVAP 164

  Fly   176 PKIRGRLILGTSLGLASGILLMYCLGYF---IRHNIQLIFGISCCYQLAATLL---VFP-MPESP 233
            ...|||.:....|.:..|:||.:.|.:.   :....:..||.:    |...||   |.| :|:||
Zfish   165 AAWRGRCVCVYELMVVLGMLLGFGLSWAFAGVPDGWRFTFGGA----LLPALLQAGVMPLLPDSP 225

  Fly   234 SWLLTRGKEERARKSLRYFR-GLPKKEVDYVPEFEAELAHMKELADASNTTAAGESLSQMIH--- 294
            .:||.:.:|:.|..:|...| |:  |||:.|   |.||..::        .|.|   ::.:|   
Zfish   226 RFLLAQQREKEAHATLLRLRAGI--KEVEPV---EDELRAIR--------LAMG---AERLHGFL 274

  Fly   295 -----RPEVYKPVLMMTTFFGFQQACGVVVIIVYAVQIAQQAG---------------------- 332
                 |..:.:.:|:.......|||.|...|:.||..:....|                      
Zfish   275 DLFQSRDNMLQRLLVGAALVFLQQATGQPNILAYASTVLSSVGFHGNEAATLASTGFGVVKVGGT 339

  Fly   333 ----VTIDPV---------LVAVMLGVARI--IT--------------------TLFMSG-IFEK 361
                ..:|.|         :|.:||..|.:  ||                    |||.:| ..:.
Zfish   340 IPAIFLVDKVGPKALLCVGVVVMMLSTATLGAITMQSRTHVSSLCRGPGNTANFTLFETGDETDI 404

  Fly   362 WGRKPSGIFSATGMGACMLLLAGGN-----WFPD-----------------------TLGTLH-- 396
            ....|.|::...........|...|     |..:                       .|.:||  
Zfish   405 QTNTPLGLYQPQNKLKTNAFLTSINDTREHWILNHTYDHRTALIETAELSKKDSAKIALQSLHEV 469

  Fly   397 -----WLPVACIVAHIVFSTMGMLTLPFFMISEVFPQRARGSASGIAIFFGMILAFIMLKIYPNM 456
                 |:.:..::.::...::.:..:...::|.:||...||.|..:...|......::...:..:
Zfish   470 SPSLKWISLVSLLVYVAGFSISLGPMVHVVLSAIFPTGIRGKAVSVISAFNWATNLLISMTFLTL 534

  Fly   457 EAALGTANLFAFYAGISFLAAAFIGVFVPETRGRTLEELEE 497
            ...:|...:...|:.:|||...|:.||||||:||:||::.:
Zfish   535 TERIGLPTVIFSYSAMSFLLVVFVIVFVPETKGRSLEQISK 575

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4607NP_572380.1 MFS 55..484 CDD:119392 117/557 (21%)
SP 67..495 CDD:273317 122/556 (22%)
slc2a12NP_956832.1 MFS 48..395 CDD:119392 92/399 (23%)
SP 49..573 CDD:273317 128/576 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170577379
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.750

Return to query results.
Submit another query.