DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4607 and ght3

DIOPT Version :9

Sequence 1:NP_572380.1 Gene:CG4607 / 31653 FlyBaseID:FBgn0029932 Length:525 Species:Drosophila melanogaster
Sequence 2:NP_592790.1 Gene:ght3 / 2541758 PomBaseID:SPAC1F8.01 Length:555 Species:Schizosaccharomyces pombe


Alignment Length:520 Identity:123/520 - (23%)
Similarity:219/520 - (42%) Gaps:77/520 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 LMVFLGNSGVLGSGMVVSMPAVT-----LNQLHDETQPFWLNKDESSWFASIQ----NMACPLGG 102
            |:||:..||.|......|:..:.     .::..|...|...:...|:|..::.    |..|..|.
pombe     9 LVVFISMSGWLQGADTGSISGILGMRDFQSRFADRYNPISNSYSYSAWRQALLTGTINAGCLFGA 73

  Fly   103 LLVSYFLDRIGRKHTILLTNLIGLIGWILLVTSFMHSDRDMIYYQMLLGRCFGGIMIGMF--VSP 165
            :|.|.|.:|||:|::|...:.:.:|..:||||:...      :.|:|:|:...|:.||..  :||
pombe    74 MLSSPFTERIGKKYSICFFSGVYIIAELLLVTAVPS------WIQVLVGKILAGVGIGALSVLSP 132

  Fly   166 VGVYSAEISLPKIRGRLILGTSLGLASGILLMYCLG---YFIRHNI--QLIFGISCCYQLAATLL 225
              .|.:|::.|:|||.::....:......|:..|:.   :.:|...  :..|||:..:.:...:.
pombe   133 --GYQSEVAPPQIRGAVVATYQIFSTGAALVAACINMGTHKLRKTASWRTSFGINMLWGILLMVG 195

  Fly   226 VFPMPESPSWLLTRGKEERARKSLRYFRGLPKKEVDYVPEFEAELAHMKELADASNTTAAGESLS 290
            |..:||||.:|:.:|::|.|   ||....:            |||:...|:...:..|...:...
pombe   196 VLFLPESPRYLIYKGRDEEA---LRIMCNM------------AELSPESEIIQTNFNTIKSDIEI 245

  Fly   291 QMIHRP----EVYKPVLMMTTFFG-----FQQACGVVVIIVYAVQIAQQAGVTIDPVLVAVMLGV 346
            :|....    |::...:...|..|     |::..|......||.|:.:..|:| |..|.||:||.
pombe   246 EMAGGKARWIEIFGKDIRYRTCLGFLVMLFRELIGNNYYFYYATQVFKGTGMT-DIFLPAVILGA 309

  Fly   347 ARIITTLFMSGIFEKWGRKPSGIFSATGMGACMLLLA--GGNWFPDTLGTLHWLPVACIVAHIVF 409
            ....||.......:..||:...||.|.....|..:.|  |........||......:.:   |||
pombe   310 INFGTTFGALYTIDNLGRRNPLIFGAAFQSICFFIYAAVGDRKLIYKNGTSDHRAGSVM---IVF 371

  Fly   410 STMGMLT-------LPFFMISEVFPQRARGSASGIAIFFGMILAFIMLKIYPNMEAALGTANLFA 467
            |.:.:.:       :.:.::.|.||.|.|...:.:|.....:..|::....|.:..|:| ..|..
pombe   372 SCLFLFSYCCSWGPMGWVIVGETFPIRYRSKCASVATSGNWLGNFMISFFTPFINNAIG-FKLGY 435

  Fly   468 FYAGISFLAAAFIGVFVPETRGRTLEELEE-------RWQTGKFSRRLTIVNLKDVELHEVFLKK 525
            .||.|:..::..|.....||:|.||||:.:       .|::.|:        ::::|.|.:...|
pombe   436 IYACINLFSSFMIFFLAKETKGLTLEEVNDLYMSNIKPWESYKY--------VREIESHRIHFSK 492

  Fly   526  525
            pombe   493  492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4607NP_572380.1 MFS 55..484 CDD:119392 107/462 (23%)
SP 67..495 CDD:273317 110/461 (24%)
ght3NP_592790.1 Sugar_tr 9..467 CDD:278511 118/485 (24%)
MFS 10..452 CDD:119392 110/469 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.