DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4607 and ght8

DIOPT Version :9

Sequence 1:NP_572380.1 Gene:CG4607 / 31653 FlyBaseID:FBgn0029932 Length:525 Species:Drosophila melanogaster
Sequence 2:NP_587746.1 Gene:ght8 / 2539300 PomBaseID:SPCC548.06c Length:547 Species:Schizosaccharomyces pombe


Alignment Length:504 Identity:109/504 - (21%)
Similarity:199/504 - (39%) Gaps:90/504 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 LMVFLGNSGVLGSGMVVSMPAVT---------LNQLHDETQPFWLNKDESSWFASIQNMACPLGG 102
            ::||:..:|.:......|:..:|         .::.:..|..:..:.........:.|:....|.
pombe     9 MLVFVSMAGWMFGADTGSIGGITNMRDFQSRFADRYNPVTDTYSYSSARQGLITGMVNVGSMTGC 73

  Fly   103 LLVSYFLDRIGRKHTILLTNLIGLIGWILLVTSFMHSDRDMIYYQMLLGRCFGGIMIGMFVSPVG 167
            :|.|..:||||::.:|:...::.|||.||.||:...      :.|:::.:.:.|:.||.......
pombe    74 ILSSPLMDRIGKRVSIMFWTIVYLIGIILQVTAVPS------WVQIMVAKIWTGLAIGALSVLAP 132

  Fly   168 VYSAEISLPKIRGRLILGTSLGLASGILLMYC--LGYFIRHNI---QLIFGISCCYQLAATLLVF 227
            .:.:|::...:||.::....|.:..||.:..|  :|....|..   ::..||:..:.:...:.:.
pombe   133 GFQSEVAPATLRGTIVTTYQLAVTGGIFIAACINMGTHKLHKTAQWRVSMGINLLWGIIMFIGIS 197

  Fly   228 PMPESPSWLLTRGKEERARKSLRYFRGLPKKEVDYVPEF-------EAELAHMKELADASNTTAA 285
            .:||||.:|:..||:|.|...:.....||::......|:       |||:        |......
pombe   198 FLPESPRYLIAIGKDEEALDIMCKNNVLPREHEIIQTEYHVIKTDCEAEM--------AGGPATW 254

  Fly   286 GESLSQMIHRPEVYKPVLMMTTFFG-----FQQACGVVVIIVYAVQIAQQAGVTIDPVLVAVMLG 345
            |:.|...|.    |:      ||.|     .||..|......|..::.:..|:. .|.|.|::|.
pombe   255 GDILGADIR----YR------TFLGLGVMSLQQLTGDNYYFYYGFEVFEGTGMN-SPYLSALILD 308

  Fly   346 VARIITTLFMSGIFEKWGRKPSGIFSATGMGACMLLLAGGNWFPDTL---------------GTL 395
            ......|.             .|:|.....|..|.|:.||.|...|.               ||.
pombe   309 AVNFGCTF-------------GGLFVLEFFGRRMPLIIGGVWQSITFFIYAAVGNRALTRKNGTS 360

  Fly   396 HWLPVACIVAHIVFSTMGMLTL-------PFFMISEVFPQRARGSASGIAIFFGMILAFIMLKIY 453
            :....|.:   ||||.:.:.:.       .:.::.|.:|.|.|...:.:|.....:..|::....
pombe   361 NHRAGAVM---IVFSCLFIFSFAQTWGPAAYVIVGESYPIRYRSKCAAVATTGNWLWGFLITFFT 422

  Fly   454 PNMEAALGTANLFAFYAGISFLAAAFIGVFVPETRGRTLEELEERWQTG 502
            |.:..::|....:.| |..:..||..|.:|..||:|.||||:.|.:.:|
pombe   423 PFISDSIGFKYGYIF-AACNLCAACIIFLFAHETKGLTLEEINELYLSG 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4607NP_572380.1 MFS 55..484 CDD:119392 97/476 (20%)
SP 67..495 CDD:273317 102/475 (21%)
ght8NP_587746.1 MFS 10..451 CDD:119392 99/482 (21%)
Sugar_tr 11..467 CDD:278511 108/497 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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