DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4607 and K08F9.1

DIOPT Version :9

Sequence 1:NP_572380.1 Gene:CG4607 / 31653 FlyBaseID:FBgn0029932 Length:525 Species:Drosophila melanogaster
Sequence 2:NP_506734.2 Gene:K08F9.1 / 187167 WormBaseID:WBGene00010684 Length:490 Species:Caenorhabditis elegans


Alignment Length:478 Identity:107/478 - (22%)
Similarity:204/478 - (42%) Gaps:72/478 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 GSGMVVSMPAVT-----LNQ---------LHDET-QPFWLNKDESSWFASIQNMACPLGGLLVSY 107
            |..:|::.|:..     :||         |.|.| |..|      |:..::..:....|...:.:
 Worm    25 GYNLVLTNPSQDAFLSFMNQTFAKRFDGGLSDHTLQNIW------SFVVAVLFLGALAGSFSIPF 83

  Fly   108 FLDRIGRKHTILLTNLIG-LIGWILLVTSFMHSDRDMIYYQMLLGRCFGGIMIGMFVSPVGVYSA 171
            ..:.:|||:.:.::..:| |.|.:.:.:.|:     .::...::.|...|..:.:.:...|::.:
 Worm    84 IAEGVGRKNGLYISISVGVLAGGMSIASKFI-----PLFELYIISRVVMGWSVSVSLGLSGIFLS 143

  Fly   172 EISLPKIRGR--LILGTS--LGLASGILL----------MYCLGYFIRHNIQLIFGISCCYQLAA 222
            |.|..:.||.  ::.||:  ||...|.::          ::.:.|.....|.|:||        |
 Worm   144 EASPKQNRGAIGMMTGTAIQLGTVVGSVVAMPQIFGTDDLWWVIYATEIGIMLVFG--------A 200

  Fly   223 TLLVFPMPESPSWLLTRGKEERARKSLRYFRGLPKKEVDYVPEFEAELAHMKELADASNTTAAGE 287
            .|..|  ||||.:|:.:|..|.|..|:.::....|:|.|         .|:||:......:....
 Worm   201 ALPFF--PESPGYLIQKGSLESATISISFYYKCEKEEAD---------KHVKEIQKEQMNSTKKF 254

  Fly   288 SLSQMIHRPEVYKPVLMMTTFFGFQQACGVVVIIVYAVQIAQQAGVTIDPVLVAVMLG----VAR 348
            ::..:|.:..:.....:...........||.||..:|.:|....|:.   ||.|.:..    :..
 Worm   255 TMLDVIQQKSLRDKAFVGAVVTFVMSFSGVAVISAFAFEILVNTGLN---VLQASLANDATTIVS 316

  Fly   349 IITTLFMSGIFEKWGRKPSGIFSATGMGACMLLLAGGNWFPDTLG--TLHWLPVACIVAHIVFST 411
            :|:::....|.:|.||:|..:.|..|:..|.|::.|..:..|..|  .|.::.:..|.....|..
 Worm   317 VISSVLAIAIIDKNGRRPLLLISLAGILICNLIIFGLMFTFDKFGNQVLGFILIFFICIFQFFFA 381

  Fly   412 MGMLTLPFFMISEVFPQRARGSASGIAIFFGMILAFIMLKIYPNMEAALGTA--NLFAFYAGISF 474
            :|...|.:|:.:|:..|.||.:|...|....||..|.::..:..|:..||.|  .|..|.|.:: 
 Worm   382 LGPGPLSYFINAELVGQDARSAAQSWASVVQMISQFSIITAFLPMKNQLGEAWSYLILFVAPVA- 445

  Fly   475 LAAAFIGVFVPETRGRTLEELEE 497
            ::..|:...:|||:.::..|:||
 Worm   446 VSLVFLYFSLPETKNKSPIEVEE 468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4607NP_572380.1 MFS 55..484 CDD:119392 101/463 (22%)
SP 67..495 CDD:273317 101/465 (22%)
K08F9.1NP_506734.2 MFS 13..461 CDD:391944 104/469 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158019
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.850

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