DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4607 and hmit-1.2

DIOPT Version :9

Sequence 1:NP_572380.1 Gene:CG4607 / 31653 FlyBaseID:FBgn0029932 Length:525 Species:Drosophila melanogaster
Sequence 2:NP_507624.1 Gene:hmit-1.2 / 180206 WormBaseID:WBGene00013074 Length:613 Species:Caenorhabditis elegans


Alignment Length:523 Identity:112/523 - (21%)
Similarity:190/523 - (36%) Gaps:147/523 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 SWFASIQNMACPLGGLLVSYFLDRIGRKHTILLTNLIGLIGWILLVTSFMHSDRDMIYYQMLLGR 152
            :||:...:              ||.|||..|:.:.||.:.|.::...::..       ..||:||
 Worm    83 AWFSGAGS--------------DRYGRKPIIIGSTLIFVCGAVICAVAWTK-------IVMLIGR 126

  Fly   153 CFGGIMIGMFVSPVGVYSAEISLPKIRGRLILGTSLGLASGILLMYCLG--------YFIRHNIQ 209
            .|.|:.||.....|.||..|.|...:||.|:...::.::.|.::...:|        |.|...:.
 Worm   127 IFLGVGIGFASMVVPVYLGEASPTHVRGTLVSAFAMMISFGQVVANIMGGVFSYWEPYTIGWRLM 191

  Fly   210 LIF-GISCCYQLAATLLVFPMPESPSWLLTRGKEERARKSLRYFRGLPKKEVDYVPEFEAELAHM 273
            ..| ||....|....:.   :||:|.||...|..|:|.:.|....|...:.::|      |||.:
 Worm   192 FAFAGIPALIQFVCFIF---LPETPRWLYENGHTEQAEQVLEKIYGGNTEWIEY------ELAEI 247

  Fly   274 KELAD-----ASNTTAAGESLSQMIHRPEVYKPVLMMTTFFGFQQACGVVVIIVYAVQIAQQAGV 333
            |..|:     ......:|..:.:::..|.|.|...:.:....|||..|:..|:.|...|.:.||:
 Worm   248 KTYAEERQKQMEEEKKSGPVIWRILKTPHVLKACFIGSMLQAFQQLAGINTILYYTADIIRSAGI 312

  Fly   334 ----TIDPVLVAVMLGVARIITTLFMSGIFEKWGRKPSGIFSATG-------MGACMLL------ 381
                ||  :.::|:|.:..:|.........||.||:...:||..|       :|...||      
 Worm   313 ENYHTI--IWISVILSICNLIGPFAPMFFIEKLGRRKLFLFSCAGVVVSLVLIGVSFLLVGNDSA 375

  Fly   382 --------LAGGNW--------------------------------------------------- 387
                    |..||:                                                   
 Worm   376 PNFDRSAYLLAGNYQSNGEAESCLMLSNCDSCVTSEHCGFCEDSETRTGFCLPVDHNDVTLYSST 440

  Fly   388 -------------FPDTLGTLHW-----------LPVACIVAHIVFSTMGMLTLPFFMISEVFPQ 428
                         ||:....: |           ||:..:..:::..:.|..:||:.:.||.:|.
 Worm   441 GLCTNGLDKSNSSFPNATSYV-WQKHHCTTSYTILPIVMMGVYLLTFSCGFTSLPWVLNSEFYPM 504

  Fly   429 RARGSASGIAIFFGMILAFIMLKIYPNMEAALGTANLFAFYAGISFLAAAFIGVFVPETRGRTLE 493
            .||.:...|:.....:...|:...|.::..|:.....|..||..:.:|..||...||||.|.:::
 Worm   505 WARSTCVSISTLSNWVFNLIIALTYLSLTHAITKYGAFWLYAIFTIIAFIFIYFLVPETTGYSID 569

  Fly   494 ELE 496
            |:|
 Worm   570 EVE 572

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4607NP_572380.1 MFS 55..484 CDD:119392 105/509 (21%)
SP 67..495 CDD:273317 110/520 (21%)
hmit-1.2NP_507624.1 MFS 32..562 CDD:421695 106/511 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158112
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4448
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X729
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.700

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