DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4607 and hmit-1.1

DIOPT Version :9

Sequence 1:NP_572380.1 Gene:CG4607 / 31653 FlyBaseID:FBgn0029932 Length:525 Species:Drosophila melanogaster
Sequence 2:NP_507623.1 Gene:hmit-1.1 / 180205 WormBaseID:WBGene00013073 Length:606 Species:Caenorhabditis elegans


Alignment Length:600 Identity:132/600 - (22%)
Similarity:230/600 - (38%) Gaps:133/600 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 SHAKEKPLGEGRLAVLRQELMVFLGNSGVLGS---GMVVSMPAVTLNQLHDETQPFWLNKDESSW 89
            |..::||....:|.:    .:..|..:.|:|.   |...|:.:..:..:.|..   .|...::.|
 Worm     9 SSGQDKPAHTPKLGL----FVYILAAASVIGGFLFGYDTSVVSAAMLYMPDAP---GLKPMDTVW 66

  Fly    90 ---FASIQNMACPLGGLLVSYFLDRIGRKHTILLTNLIGLIGWILLVTSFMHSDRDMIYYQMLLG 151
               ..||......:|.|:.....|.|||:..||..:.|..||.::...|       :....:|:|
 Worm    67 QEVLVSISPGMAAVGSLMSGTSSDYIGRRKVILGASAIFTIGALVCAAS-------VNKIMLLVG 124

  Fly   152 RCFGGIMIGMFVSPVGVYSAEISLPKIRGRLILGTSLGLASGILLMYCLG----YFIRHNI--QL 210
            |...||.||.....|.||..|.:...:||.|:...:|.::.|.::....|    |...:|:  :|
 Worm   125 RVLLGIAIGFASMIVPVYLGETAPTHVRGMLVAAFALMISFGQVVANITGGAFSYIDPYNVGWRL 189

  Fly   211 IFGISCCYQLAATLLVFPMPESPSWLLTRGKEERARKSLRYFRGLPKKEVDY----VPEFEAELA 271
            :|..:....:...:....:||:|.||...|.|...|:.|.......|:.|:|    :..|..:.|
 Worm   190 MFAFAAVPSIIQFVCFMFLPETPRWLYENGFETETREVLEKVYNGDKEWVEYEMAEIIAFNEDQA 254

  Fly   272 HMKELADASNTTAAGESLSQMIHRPEVYKPVLMMTTFFGFQQACGVVVIIVYAVQIAQQAGVTID 336
            ...|.|.||     |..:.:::..|.|.|...:.:....|||..|:..|:.|...|.:.:|::.:
 Worm   255 KENEKAHAS-----GPVIWRILKTPHVLKACFIGSMLQAFQQLAGINTILYYTADIIRSSGISNN 314

  Fly   337 --PVLVAVMLGVARIITTLFMSGIFEKWGRKPSGIFSA-------TGMGACMLLL---------- 382
              .:.::|:|.:...|.......:.||.||:...:||.       ..:|...||:          
 Worm   315 HTTIWISVLLSLCNFIGPFVPMSLIEKVGRRIIFLFSCGLVVLSLVFIGVAFLLVNHDSAATLPA 379

  Fly   383 --AGGNW---FPDTLGTL----------------------------------------------- 395
              .|.|:   :||..|.:                                               
 Worm   380 NQYGSNFNSSYPDAKGCMAYSNCDYCVTTDACGFCHDANTKQGYCLPAGFDNPEVYSSTGSCTNS 444

  Fly   396 --------HW-----------LP-VACIVAHIVFSTMGMLTLPFFMISEVFPQRARGSASGIAIF 440
                    .|           || :||.|..:.||: |..:||:.:.||.:|..||.:...|:..
 Worm   445 NGSIANNFKWEKYYCDTKYTLLPIIACGVYLLTFSS-GFTSLPWVLNSEFYPMWARSTCVAISTT 508

  Fly   441 FGMILAFIMLKIYPNMEAALGTANLFAFYAGISFLAAAFIGVFVPETRGRTLEELE------ERW 499
            ...:...|:...|.::...:|....|..|||::.:|..||...||||:|.::||:|      ::.
 Worm   509 SNWVFNLIIALTYLSLTQVIGKYGAFWLYAGLTVIAFIFILFLVPETKGYSIEEVEMLFMNKKQR 573

  Fly   500 QTGKFSRRLTIVNLK 514
            :..:..||.|:..::
 Worm   574 REAESRRRETVTEVR 588

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4607NP_572380.1 MFS 55..484 CDD:119392 116/535 (22%)
SP 67..495 CDD:273317 118/531 (22%)
hmit-1.1NP_507623.1 MFS_HMIT_like 31..554 CDD:340918 117/538 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X729
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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