DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4607 and hmit-1.3

DIOPT Version :9

Sequence 1:NP_572380.1 Gene:CG4607 / 31653 FlyBaseID:FBgn0029932 Length:525 Species:Drosophila melanogaster
Sequence 2:NP_497725.2 Gene:hmit-1.3 / 175458 WormBaseID:WBGene00010811 Length:604 Species:Caenorhabditis elegans


Alignment Length:563 Identity:120/563 - (21%)
Similarity:212/563 - (37%) Gaps:137/563 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 NSGVLGSGMVVSMPAVTLNQLHDETQPFWLNKDESSW---FASIQNMACPLGGLLVSYFLDRIGR 114
            ::|::.:.|:....|..:..|            :|.|   ..||......:|.|......|.:||
 Worm    45 DTGIVSAAMLYVPNASGIKPL------------DSVWQEIIVSITPGVAAIGSLCSGPGSDFLGR 97

  Fly   115 KHTIL---LTNLIGLI----GWILLVTSFMHSDRDMIYYQMLLGRCFGGIMIGMFVSPVGVYSAE 172
            |..|:   :|..||.|    .|..::              :|:||...|:.||.....|.:|.:|
 Worm    98 KKIIIGASVTFTIGAIICAAAWTKII--------------LLIGRILLGLAIGFASMIVPIYVSE 148

  Fly   173 ISLPKIRGRLILGTSLGLASGILLMYCLG----YFIRHNI--QLIFGISCCYQLAATLLVFPMPE 231
            .|...|||:|:.|..|.:..|:::...:|    |.....:  :|:|..:....:...:....:||
 Worm   149 ASPSHIRGKLVTGFQLMITVGLVIANIIGGAFSYVDPDQVGWRLMFAFAAVPAIIQFVCFLFLPE 213

  Fly   232 SPSWLLTRGKEERARKSL-RYFRGLPKKEVDYVPEFEAELAHMKELADASNTTAAGESLSQMIHR 295
            ||.||...|:...||:.| |.:.| ..:.|||... |...::.:||...:.....|.::.:::..
 Worm   214 SPRWLYEHGRTVEAREVLTRIYNG-HTEWVDYEIN-EISFSYEEELRAKAEHAGNGPTIIRILKT 276

  Fly   296 PEVYKPVLMMTTFFGFQQACGVVVIIVYAVQIAQQAGVTIDPVLVAVMLGVARI--ITTLFMSGI 358
            |.|.|.:::.:....|||..|:..::.|...|.:.|||..:...:.:.:|.:.|  :.|.....:
 Worm   277 PHVRKAMIIGSLLQMFQQLSGINTVMYYTGNIIRSAGVKDNHTTIWISVGTSAINFLGTFIPIAL 341

  Fly   359 FEKWGRKPSGIFSATG-------MGACMLLLAGG------------NWFPDTL------------ 392
            .|:.||:...:.|..|       ||...||:...            |:.|...            
 Worm   342 VERVGRRVLLLVSMIGVILFLIAMGVSFLLINNDSLRTFDQQNYTLNYNPSVKHAAKCLKYSNCD 406

  Fly   393 ----------------------------------------------GT-LHW-----------LP 399
                                                          || ..|           ||
 Worm   407 FCVTDENCGFCESKVAKKGYCLPFPSDDSSDYSATGICEFSNLTNNGTDFEWEDTYCHTKFTVLP 471

  Fly   400 VACIVAHIVFSTMGMLTLPFFMISEVFPQRARGSASGIAIFFGMILAFIMLKIYPNMEAALGTAN 464
            :..:|.:::..:.|...||:.:.:|.:|..||.:|..::.....|...|:...:.::..|.....
 Worm   472 IIIMVFYLLSFSAGYAPLPWVLNAEFYPLWARSTAVSVSTACNWIFNLIVSLTFLSLSQAATKYG 536

  Fly   465 LFAFYAGISFLAAAFIGVFVPETRGRTLEELEERWQTGKFSRR 507
            .|..|.|.:.:|..|:..|||||:|.:::|:|..:.| |..||
 Worm   537 TFFIYCGCTMVALVFVFFFVPETKGYSIDEVEMLFMT-KEERR 578

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4607NP_572380.1 MFS 55..484 CDD:119392 108/536 (20%)
SP 67..495 CDD:273317 112/535 (21%)
hmit-1.3NP_497725.2 MFS 34..558 CDD:421695 110/540 (20%)
MFS <190..>249 CDD:421695 17/60 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158117
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X729
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.740

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