DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3032 and Sry-beta

DIOPT Version :9

Sequence 1:NP_001284974.1 Gene:CG3032 / 31648 FlyBaseID:FBgn0029928 Length:431 Species:Drosophila melanogaster
Sequence 2:NP_001303451.1 Gene:Sry-beta / 43570 FlyBaseID:FBgn0003511 Length:356 Species:Drosophila melanogaster


Alignment Length:472 Identity:90/472 - (19%)
Similarity:155/472 - (32%) Gaps:186/472 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 SVRELCCTC-------LLQLEK--------EPLKTELQSDEIPISQELQQLLNINLSQDVENQDA 58
            |.|..|..|       :.||.:        :|:|..|:..|..|:|.|:.|.|            
  Fly     3 STRPFCFVCGKEKSVGVFQLIEGCIVPGTFKPIKDILKYFEKIINQRLELLPN------------ 55

  Fly    59 DQQWLPNELCLECRSAVQNFEKFRRKADECRKQLLEML--------KKDPRE----------PTF 105
                  :..|.:|...:.|:::..|...:.::|:.:.|        |.:.::          |.|
  Fly    56 ------SAACRDCLEYLFNYDRLVRNLSQVQRQIADALLGCRQVEGKAETKQQAAKRARVQVPAF 114

  Fly   106 EVVYDGREEDQESLHGLEPPEPAPDPDPIDEPAIKSD---------------KSPRKSFRGSRNT 155
            ::|         ....|:.||..|..:...|..:|.:               .|..:.|......
  Fly   115 KIV---------QATALKEPERQPGEEDECEEFMKEEMLDEEFQFSEPDDSMPSSEEEFFTETTE 170

  Fly   156 LKCSVCRRSFAHQITLAAHIRKVHEGSKRPFQCDQCEKAYSFMGGLYTHIREVHAPKERRHPCDQ 220
            :.|.:|...|:.|..|..||:           .|.|:|:                          
  Fly   171 IPCHICGEMFSSQEVLERHIK-----------ADTCQKS-------------------------- 198

  Fly   221 PGCERIYTSRIAMQKHKRLKHSPRDRDALKKFICEQCGASFNQSANLKYHLKTKHPTEDEVAARE 285
                                         ::..|..||            ||.|   :|||    
  Fly   199 -----------------------------EQATCNVCG------------LKVK---DDEV---- 215

  Fly   286 GGAGERHFCDICQKEFHSRYTLKYHTLQQHEVQEELPHECQVCGRRMAKKFMLLQHMLMH-SNDK 349
                                 |..| :..||.:.||  ||:.|.::.:.|..:|:||.:| ...|
  Fly   216 ---------------------LDLH-MNLHEGKTEL--ECRYCDKKFSHKRNVLRHMEVHWDKKK 256

  Fly   350 LPCEHCGRRFARRFELEAHVRAVHLKLKPFPCHHCPESFASRKTLRHHEYIHTGEKP-YICDTCG 413
            ..|:.||.||:..:.:..|:.....:.....|..|.:.|.:::|.:||...|..::| |.|..|.
  Fly   257 YQCDKCGERFSLSWLMYNHLMRHDAEENALICEVCHQQFKTKRTYKHHLRTHQTDRPRYPCPDCE 321

  Fly   414 QAFRQQTCLKNHRKVHE 430
            ::|..:..||.|::||:
  Fly   322 KSFVDKYTLKVHKRVHQ 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3032NP_001284974.1 zf-AD 13..95 CDD:285071 18/96 (19%)
C2H2 Zn finger 158..179 CDD:275368 7/20 (35%)
C2H2 Zn finger 188..209 CDD:275368 3/20 (15%)
C2H2 Zn finger 218..239 CDD:275368 0/20 (0%)
C2H2 Zn finger 254..275 CDD:275368 5/20 (25%)
C2H2 Zn finger 294..315 CDD:275368 2/20 (10%)
C2H2 Zn finger 325..345 CDD:275368 6/19 (32%)
C2H2 Zn finger 352..373 CDD:275368 6/20 (30%)
C2H2 Zn finger 381..401 CDD:275368 6/19 (32%)
C2H2 Zn finger 409..429 CDD:275368 6/19 (32%)
Sry-betaNP_001303451.1 C2H2 Zn finger 203..223 CDD:275368 11/60 (18%)
C2H2 Zn finger 231..251 CDD:275368 6/19 (32%)
C2H2 Zn finger 259..308 CDD:275368 12/48 (25%)
C2H2 Zn finger 288..303 CDD:275370 4/14 (29%)
zf-C2H2 315..337 CDD:278523 7/21 (33%)
C2H2 Zn finger 317..337 CDD:275368 6/19 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24409
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.