DRSC/TRiP Functional Genomics Resources

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Protein Alignment cm and APM3

DIOPT Version :9

Sequence 1:NP_001259302.1 Gene:cm / 31647 FlyBaseID:FBgn0000330 Length:415 Species:Drosophila melanogaster
Sequence 2:NP_009847.4 Gene:APM3 / 852591 SGDID:S000000492 Length:483 Species:Saccharomyces cerevisiae


Alignment Length:504 Identity:110/504 - (21%)
Similarity:197/504 - (39%) Gaps:110/504 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MIHSLFIVNSGGEVFLE----------KH-WRSVVSRSVCEYFLDAQRAAPYDVPPVIATP---H 51
            |..|.:|.::..::..:          || |..|  :|.|...|:...:..|....::...   :
Yeast     1 MYLSFYITDTKNKLIFQYLLGATAPSFKHLWTRV--QSTCPQLLEDSSSDDYLDHSMVGRDLEVY 63

  Fly    52 YYLITVQRDTVSLVAACKQEVPPLFVIEFLHRVVDTFQDYFGDCSESV--IKDNYVVVYELLDEM 114
            .|...:.:.....:|:..:...||....||..:.....:||.....|:  |.:||..:..:.:..
Yeast    64 KYFSVINKLNYWCLASTSKSKGPLDCFTFLETIDRILLEYFDKDKLSIKKIVNNYDRISLIFNCC 128

  Fly   115 LDNGFPLATES---NILKELIKPPNILRTIANTVTGKSNVSTTLP--------SGQLS------- 161
            ::.|.|..::.   |.:||.:...:.|....::.......:..||        ..|:|       
Yeast   129 VEAGEPNVSDMLYVNKIKEAVPERSDLSKFISSTAHNLQQAVQLPQQRQQQLQQNQISRGSNSLI 193

  Fly   162 ----AVRWRRS-GVRYTNNEAYFDVIEEVDAIIDKSGS---TVFAEIQGHIDCCIKLSGMPDLTL 218
                .|.||.| ..::.|||.|.|::|....:.:|..|   .:...|.|.:|....|:..|.:.:
Yeast   194 ENEEIVPWRTSRASKHENNELYVDLLETFHVVFEKKKSHLRLLTGSIHGIVDVRSYLNDNPLVAV 258

  Fly   219 SFMNPRLFDDV---SFHPCVRYKRWE-AERLLSFIPPDGNFRLMSYHI--SSQ---------SVV 268
            ....  :.:|:   |.|.||...... :...::||||||.|||:.|.:  |||         |:.
Yeast   259 KLNT--MGNDIGIPSLHDCVEINDGVFSPSNITFIPPDGKFRLLEYSVDLSSQVKQSGVRMNSIG 321

  Fly   269 AIPIYIRHNFSIKTGEQGRLDLTIGPRNTLGRTVDKVKLELTMPRCVLNCLLTPN---------- 323
            .:.::.::... |..::..|.|.|.....:.: ||.:|::|...  |.|.  .||          
Yeast   322 LMSLHFQNGLG-KDSDEFELSLNIENFKKVSQ-VDDLKIDLQFN--VENA--DPNEIAYKIKILR 380

  Fly   324 -------------QGKYTFDSVTKTLSWDVGRIDVSKLPNIRGSV---SITPG-TTNIDANPSVN 371
                         ||::.||..|.|          ..:|.:||.:   :..|. |..:|.. :|:
Yeast   381 NTHGRFENSIIMGQGQWIFDKSTAT----------GTVPVLRGCIEYENTGPNFTKKVDLQ-TVS 434

  Fly   372 VQFQISQLAVSGLKVNRLDM-----YGEKYKPFKGVKYLTKAGKFQVRM 415
            :::.....:.||:.|..:|:     .|:..|.:||.||.|:.|.||||:
Yeast   435 LEYSYIGQSASGIYVEAIDIVSGLTIGKNTKLYKGAKYKTQTGNFQVRL 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cmNP_001259302.1 AP_MHD_Cterm 163..414 CDD:299401 75/301 (25%)
APM3NP_009847.4 AP_MHD_Cterm 199..482 CDD:416027 75/301 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2740
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR10529
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.910

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