DRSC/TRiP Functional Genomics Resources

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Protein Alignment cm and Ap3m1

DIOPT Version :10

Sequence 1:NP_788873.1 Gene:cm / 31647 FlyBaseID:FBgn0000330 Length:415 Species:Drosophila melanogaster
Sequence 2:NP_061299.3 Gene:Ap3m1 / 55946 MGIID:1929212 Length:418 Species:Mus musculus


Alignment Length:417 Identity:287/417 - (68%)
Similarity:354/417 - (84%) Gaps:3/417 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MIHSLFIVNSGGEVFLEKHWRSVVSRSVCEYFLDAQRAAP--YDVPPVIATPHYYLITVQRDTVS 63
            ||||||::|..|::||||||:||||:|||:||.:||..|.  .:|||||:|||:|||::.||.:.
Mouse     1 MIHSLFLINCSGDIFLEKHWKSVVSQSVCDYFFEAQEKAADVENVPPVISTPHHYLISIYRDKLF 65

  Fly    64 LVAACKQEVPPLFVIEFLHRVVDTFQDYFGDCSESVIKDNYVVVYELLDEMLDNGFPLATESNIL 128
            .|:..:.||||||||||||||.||||||||:|||:.||||.|:|||||:||||||||||||||||
Mouse    66 FVSVIQTEVPPLFVIEFLHRVADTFQDYFGECSEAAIKDNVVIVYELLEEMLDNGFPLATESNIL 130

  Fly   129 KELIKPPNILRTIANTVTGKSNVSTTLPSGQLSAVRWRRSGVRYTNNEAYFDVIEEVDAIIDKSG 193
            |||||||.|||::.|::||.|||..|||:||||.:.|||:||:||||||||||:||:||||||||
Mouse   131 KELIKPPTILRSVVNSITGSSNVGDTLPTGQLSNIPWRRAGVKYTNNEAYFDVVEEIDAIIDKSG 195

  Fly   194 STVFAEIQGHIDCCIKLSGMPDLTLSFMNPRLFDDVSFHPCVRYKRWEAERLLSFIPPDGNFRLM 258
            |||||||||.||.||||||||||:||||||||.||||||||:|:||||:||:||||||||||||:
Mouse   196 STVFAEIQGVIDACIKLSGMPDLSLSFMNPRLLDDVSFHPCIRFKRWESERVLSFIPPDGNFRLI 260

  Fly   259 SYHISSQSVVAIPIYIRHNFSIKTGEQ-GRLDLTIGPRNTLGRTVDKVKLELTMPRCVLNCLLTP 322
            ||.:|||::||||:|::|:.|.|.... ||.|:||||:..:|:|::.:.:.:.||:.|||..|||
Mouse   261 SYRVSSQNLVAIPVYVKHSISFKENSSCGRFDITIGPKQNMGKTIEGITVTVHMPKVVLNMNLTP 325

  Fly   323 NQGKYTFDSVTKTLSWDVGRIDVSKLPNIRGSVSITPGTTNIDANPSVNVQFQISQLAVSGLKVN 387
            .||.||||.|||.|:||||:|...|||:::|.|::..|....:.||::|:||:|.|||:||||||
Mouse   326 TQGSYTFDPVTKVLAWDVGKITPQKLPSLKGLVNLQSGAPKPEENPNLNIQFKIQQLAISGLKVN 390

  Fly   388 RLDMYGEKYKPFKGVKYLTKAGKFQVR 414
            |||||||||||||||||:|||||||||
Mouse   391 RLDMYGEKYKPFKGVKYVTKAGKFQVR 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cmNP_788873.1 AP3_Mu_N 3..139 CDD:341441 97/137 (71%)
AP_MHD_Cterm 163..414 CDD:472082 171/251 (68%)
Ap3m1NP_061299.3 AP3_Mu_N 3..141 CDD:341441 97/137 (71%)
AP-3_Mu3A_Cterm 165..418 CDD:211371 173/253 (68%)

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