DRSC/TRiP Functional Genomics Resources

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Protein Alignment cm and carmine

DIOPT Version :10

Sequence 1:NP_788873.1 Gene:cm / 31647 FlyBaseID:FBgn0000330 Length:415 Species:Drosophila melanogaster
Sequence 2:XP_321638.4 Gene:carmine / 1281688 VectorBaseID:AGAMI1_002642 Length:414 Species:Anopheles gambiae


Alignment Length:416 Identity:314/416 - (75%)
Similarity:372/416 - (89%) Gaps:3/416 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MIHSLFIVNSGGEVFLEKHWRSVVSRSVCEYFLDAQRAAPYDVPPVIATPHYYLITVQRDTVSLV 65
            ||||||||||.|:|||||||||||||:...||||..|.:..:||||::|||:||:::||:.:|||
Mosquito     1 MIHSLFIVNSSGDVFLEKHWRSVVSRTCVSYFLDVHRESANNVPPVLSTPHHYLVSIQRNGISLV 65

  Fly    66 AACKQEVPPLFVIEFLHRVVDTFQDYFGDCSESVIKDNYVVVYELLDEMLDNGFPLATESNILKE 130
            ||||||.||||||||||||||||:|||.:|:|:|||:|||:||||||||||||:|||||.|||||
Mosquito    66 AACKQEFPPLFVIEFLHRVVDTFEDYFSECNENVIKENYVIVYELLDEMLDNGYPLATECNILKE 130

  Fly   131 LIKPPNILRTIANTVTGKSNVSTTLPSGQLSAVRWRRSGVRYTNNEAYFDVIEEVDAIIDKSGST 195
            |||||||||||||:||||||:|.|||||||||:.|||:||:||||||||||:|||||||||:|.|
Mosquito   131 LIKPPNILRTIANSVTGKSNISGTLPSGQLSAIPWRRTGVKYTNNEAYFDVVEEVDAIIDKNGQT 195

  Fly   196 VFAEIQGHIDCCIKLSGMPDLTLSFMNPRLFDDVSFHPCVRYKRWEAERLLSFIPPDGNFRLMSY 260
            :||||||:|||||||||||||:|||||||||||||||||||:||||:||:|||||||||||||||
Mosquito   196 IFAEIQGYIDCCIKLSGMPDLSLSFMNPRLFDDVSFHPCVRFKRWESERILSFIPPDGNFRLMSY 260

  Fly   261 HISSQSVVAIPIYIRHNFSIKTGEQGRLDLTIGPRNTLGRTVDKVKLELTMPRCVLNCLLTPNQG 325
            |:.|||:||||||:|||..:::|||.|||:|:||:.|:||||:.|||::.||:.|.||.|..|||
Mosquito   261 HVGSQSIVAIPIYVRHNLVLRSGEQSRLDITVGPKTTMGRTVEGVKLDICMPKAVTNCSLVVNQG 325

  Fly   326 KYTFDSVTKTLSWDVGRIDVSKLPNIRGSVSITPGTTNIDANPSVN-VQFQISQLAVSGLKVNRL 389
            |||:|:|.|.|.||:||||.:|||||||:||:  ..||.....::: |.|.|||:||||||||||
Mosquito   326 KYTYDTVNKVLHWDIGRIDAAKLPNIRGTVSV--AATNSTLETTIDRVHFTISQMAVSGLKVNRL 388

  Fly   390 DMYGEKYKPFKGVKYLTKAGKFQVRM 415
            |||||||||||||||:|||||||:||
Mosquito   389 DMYGEKYKPFKGVKYVTKAGKFQIRM 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cmNP_788873.1 AP3_Mu_N 3..139 CDD:341441 103/135 (76%)
AP_MHD_Cterm 163..414 CDD:472082 185/251 (74%)
carmineXP_321638.4 AP3_Mu_N 3..139 CDD:341441 103/135 (76%)
AP_MHD_Cterm 163..413 CDD:472082 185/251 (74%)

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