DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Inx6 and inx-20

DIOPT Version :9

Sequence 1:NP_572374.1 Gene:Inx6 / 31645 FlyBaseID:FBgn0027107 Length:481 Species:Drosophila melanogaster
Sequence 2:NP_001251235.1 Gene:inx-20 / 188818 WormBaseID:WBGene00002142 Length:483 Species:Caenorhabditis elegans


Alignment Length:497 Identity:106/497 - (21%)
Similarity:180/497 - (36%) Gaps:162/497 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 DPIF-TLHSKCTIVILLTCTFLLSAKQYFGEPILC-LSSERQA---DYVQSYCWTMGTYILPAEV 80
            |.|| .||...|...||....|:|.|.:.|.||.| |.:|.::   ||.:.|||...||:     
 Worm    45 DDIFDRLHYYYTTTFLLLTAVLISLKMFGGRPIECWLPAEYKSSWEDYTEMYCWARNTYV----- 104

  Fly    81 DRDGGSSWEYALYAPTSTAAETFNVSSLRALVAQNEQYARFISIAEGVGPETRGVTKRMY--LRY 143
                             ||.|..|:                        ||   |..|.|  :.|
 Worm   105 -----------------TAFEDDNL------------------------PE---VVNREYTMVSY 125

  Fly   144 YQWVFMILLFQSLLFYFPSFLWKVW---EGQRMEQLCCEVGDALIVEATYRTR-----LQMLTRY 200
            ||||...|::.:..||.|..:|:::   .|.|::.:.....|...|..|.||.     ...|:..
 Worm   126 YQWVPFFLVYVAFSFYAPCLIWRLFYDKSGIRLKDIMGFANDKANVVPTQRTANIRGLSAHLSSV 190

  Fly   201 FRAQFA-----PIHW----CYSIKYAFCELLNVFISILNFWLMDVVFNGFWYKYIHALAAIPVYD 256
            |:.:|.     |.|.    .::::|....|..::::|...:||:|:...::......|.:...|.
 Worm   191 FKHRFRIGEKHPYHHKVFRIFNVRYYESYLTYLYLAIKCLFLMNVLTQMYFMSRFLELDSHRYYG 255

  Fly   257 WNL---------WNLMTSRVFPKVAKCEMFVYGPSGTPNIM------DILCVLPLNILNEKIFAV 306
            :.:         |.  .|..||.|..|:|.:       .|:      .:.|||.:||..||||.:
 Worm   256 YGIFYDLIMGKGWK--ESSNFPVVTYCDMQI-------RILGHVQRHTVQCVLVINIFTEKIFFI 311

  Fly   307 LYVWFLFIALLAIMNIL------------------------------------------------ 323
            |::|:..::|::..:||                                                
 Worm   312 LWLWYTMLSLISFGSILSWIFASIPFNQRRQFIARRLELADVNFEKSRFKQELDEFVRDYIKIDG 376

  Fly   324 ---YRLL-----VICCPELRLQLLRTHLNGMPKSHVREVLASAGYGDWF--VLMCVSINVNPTLF 378
               .|::     ::.|.::...:....|.....:.:||:|....|||.:  ......:::.|:|.
 Worm   377 IFVLRMITIHSGILMCTDIVDTMWDQFLQESGHATIREILEDKSYGDDYDRSASAGGLSIEPSLR 441

  Fly   379 RE------LLEQLYAKLNQARCT-EPVFAEQPCQQVPQLAQV 413
            |:      |:.:....|:|:..| .|.|...|..::...|.|
 Worm   442 RKTSVLVPLMSREDLHLDQSPTTPAPQFLRPPSSRMASAANV 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Inx6NP_572374.1 Innexin 21..389 CDD:279248 98/470 (21%)
inx-20NP_001251235.1 Innexin 45..403 CDD:279248 87/415 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 133 1.000 Domainoid score I3133
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 134 1.000 Inparanoid score I3152
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D323554at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm4755
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11893
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X282
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.070

Return to query results.
Submit another query.