DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4586 and Acox3

DIOPT Version :9

Sequence 1:NP_572371.1 Gene:CG4586 / 31641 FlyBaseID:FBgn0029924 Length:677 Species:Drosophila melanogaster
Sequence 2:NP_445791.2 Gene:Acox3 / 83522 RGDID:69245 Length:700 Species:Rattus norvegicus


Alignment Length:679 Identity:201/679 - (29%)
Similarity:320/679 - (47%) Gaps:71/679 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LQRERAAATLDSEDFARWWAGGSGQLEERRALERRFYEDPDFAEPVHPSCLSYKERYEQTVARST 71
            |...||.|:.:|::...:| .|...|:.::.:......||.||.|........||| |....|..
  Rat    21 LSAYRARASFNSKELMLFW-DGQDVLDFKKTIFSTLENDPLFARPFGADLPLEKER-ELNFLRCK 83

  Fly    72 RFLAKLRQWQREKQPQLQLSVNMLRDFRLLLSGSLGTGLFQQSFPLRVHFSMFMTTLLSQGTEEQ 136
            | :.:...:..|...:..|.:       |:|...||...:..:....:|..:|.:|::..|: |.
  Rat    84 R-VFEYGFFNAEDMLKNPLKI-------LVLMNCLGMYDWSLANKCVLHMLVFGSTIIGSGS-EH 139

  Fly   137 QAQWLNRSWHMDGVLGTYAQTELGHGTFVRGLETRADYDPITQEFILNTPTQSSYKWWPGGLGNT 201
            ..::|.:.:::: :.|.:|.|||.||:..:.:.|.|.|||.||||||::|...:.|:|.|.||.|
  Rat   140 HFKYLEKIYNLE-IFGCFALTELSHGSNTKAMRTTAHYDPATQEFILHSPDFEAAKFWVGNLGKT 203

  Fly   202 ANVAIVLAQLYV-KGKHYGLQSFVVRIRDERTHEPLTGVDVGDIGPRLGGNGVNNGFLGLRDVRI 265
            |..|:|.||||. .|:..||.||:|:|||.:|..|:.||.|||:|.:||.||::|||.....|||
  Rat   204 ATHAVVFAQLYTPDGQCRGLHSFLVQIRDPKTLLPMPGVMVGDMGKKLGQNGLDNGFAMFHKVRI 268

  Fly   266 PRNQMLMKNAQVLTDGTF------VQGRPPLLLYGTMVYVRVITVKDVLFGLLQAATIATRYSVV 324
            ||..:|.:...|.::||:      |:.|....| |::...|:..:...:..|..|..||.|:|..
  Rat   269 PRQNLLDRTGNVTSEGTYNTPFKDVRQRLGASL-GSLSSGRISIISISVVNLKLAVIIAIRFSAT 332

  Fly   325 RRQSRINSDQPEVSVLDHITQQAKILPQIARGVSYRLVSDWLWRFYEDVL-----RQLEDESTKG 384
            |||.. .:|:.|:.||::..||.::||.:|  .:|.| ..:....:.|::     ||..|.|.:.
  Rat   333 RRQFG-PTDKEEIPVLEYPLQQWRLLPYLA--AAYAL-DHFSKTIFLDLIELQRGRQSGDHSDRQ 393

  Fly   385 RNSLPELHALSCCLKAVATDEASEGVDLLRKSCGGHGFLSSANFDSIYGLTAATYTYEGEYTVLL 449
            .....|:|||:...|.:|:..|..|:...|::|||||:|:...|..:........||||:..|||
  Rat   394 AELGREIHALASAGKPLASWTAQRGIQECREACGGHGYLAMNRFGELRNDNDPNCTYEGDNNVLL 458

  Fly   450 LQTARFL-----------------------VRQYADSLKRKVLPSS-VSYLRDTARLIWGKNLVA 490
            .||:.:|                       :..|...|.:|.:.|| ..:|...|.|...:.||.
  Rat   459 QQTSNYLLSLLEHPLQDGAHFTSPLKTVNFLEAYPGILGQKFMASSKADWLDSEAPLAAYRWLVC 523

  Fly   491 NCVRALEISAMEQVRDAWQTQKMHQSGKVSPEMASNLAG-RQLTSAAIAHAHAFFTRNALEQVEA 554
            ..:|        :....:..:|..:.........|.:.| |.|       |.||.....:::...
  Rat   524 YLLR--------ESHQRYCQEKKSRGSDFEARNNSQVYGCRPL-------ALAFMELTVMQRFHE 573

  Fly   555 LRKKGDLSPNVSLILGQLVELFVIDTFLRQSGCVLRWNNGITGTQL-RFVERRFEELLAKLRPNA 618
            ......:.|::..:||:|..|:.: ..|.|...:|.....|:|.|. :.:|.....|..:|:.:|
  Rat   574 HTHSSSVPPSLRTVLGRLSMLYGL-WCLSQHTALLYRGGYISGEQTGKAMEDAILMLCVQLKDDA 637

  Fly   619 VALVDGFDFHDRVLGSTLGCHDGRVYERL 647
            |||||.....|.||||.:|..||.:|:.|
  Rat   638 VALVDAIAPSDFVLGSPIGRADGELYKNL 666

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4586NP_572371.1 ACAD 6..653 CDD:299127 201/679 (30%)
PLN02443 7..677 CDD:178062 201/679 (30%)
Acox3NP_445791.2 AXO 19..672 CDD:173839 201/679 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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