DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4586 and Acox1

DIOPT Version :9

Sequence 1:NP_572371.1 Gene:CG4586 / 31641 FlyBaseID:FBgn0029924 Length:677 Species:Drosophila melanogaster
Sequence 2:NP_059036.1 Gene:Acox1 / 50681 RGDID:619757 Length:661 Species:Rattus norvegicus


Alignment Length:684 Identity:278/684 - (40%)
Similarity:388/684 - (56%) Gaps:41/684 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VNADLQRERAAATLDSEDFARWWAGGSGQLEERRALERRFYEDPDFAEPVHPSCLSYKERYEQTV 67
            :|.||::|||:||.:.|.......|.......||.:|.....||||....: :.|:..:|||..|
  Rat     1 MNPDLRKERASATFNPELITHILDGSPENTRRRREIENLILNDPDFQHEDY-NFLTRSQRYEVAV 64

  Fly    68 ARSTRFLAKLRQWQREKQPQLQLSVNMLRDFRLLLSGSLGTGLFQQSF--PLRVHFSMFMTTLLS 130
            .:|...:.|:|::......::..       |:         .|:..:|  |:.:::|||:.|||:
  Rat    65 KKSATMVKKMREYGISDPEEIMW-------FK---------KLYLANFVEPVGLNYSMFIPTLLN 113

  Fly   131 QGTEEQQAQWLNRSWHMDGVLGTYAQTELGHGTFVRGLETRADYDPITQEFILNTPTQSSYKWWP 195
            |||..||.:|:..|..:. ::|||||||:||||.:|||||.|.|||.|||||||:||.:|.||||
  Rat   114 QGTTAQQEKWMRPSQELQ-IIGTYAQTEMGHGTHLRGLETTATYDPKTQEFILNSPTVTSIKWWP 177

  Fly   196 GGLGNTANVAIVLAQLYVKGKHYGLQSFVVRIRDERTHEPLTGVDVGDIGPRLGGNGVNNGFLGL 260
            ||||.|:|.|||||||..:|:.|||.:|||.||:..||:||.|:.||||||:.|...::||:|.:
  Rat   178 GGLGKTSNHAIVLAQLITQGECYGLHAFVVPIREIGTHKPLPGITVGDIGPKFGYEEMDNGYLKM 242

  Fly   261 RDVRIPRNQMLMKNAQVLTDGTFVQGRPPLLLYGTMVYVRVITVKDVLFGLLQAATIATRYSVVR 325
            .:.||||..||||.|||..|||:|:.....|.|||||:||...|.:....|.:|.|||.|||.||
  Rat   243 DNYRIPRENMLMKYAQVKPDGTYVKPLSNKLTYGTMVFVRSFLVGNAAQSLSKACTIAIRYSAVR 307

  Fly   326 RQSRINSDQPEVSVLDHITQQAKILPQIARGVSYRLVSDWLWRFYEDVLRQLEDESTKGRNSLPE 390
            |||.|...:||..:||..|||.|:.|.:|...::..|..::...|   ||..|.......:.|||
  Rat   308 RQSEIKQSEPEPQILDFQTQQYKLFPLLATAYAFHFVGRYMKETY---LRINESIGQGDLSELPE 369

  Fly   391 LHALSCCLKAVATDEASEGVDLLRKSCGGHGFLSSANFDSIYGLTAATYTYEGEYTVLLLQTARF 455
            ||||:..|||..|..|:.|::..|.:|||||:..|:...:||.......|:|||.||::||||||
  Rat   370 LHALTAGLKAFTTWTANAGIEECRMACGGHGYSHSSGIPNIYVTFTPACTFEGENTVMMLQTARF 434

  Fly   456 LVRQYADSLKRKVLPSSVSYLRD--TARL------IWGK----NLVANCVRALEISAMEQVRDAW 508
            |::.|......|::...||||.|  :.|:      :|..    |.:.....|.::.|...|..|.
  Rat   435 LMKIYDQVRSGKLVGGMVSYLNDLPSQRIQPQQVAVWPTMVDINSLEGLTEAYKLRAARLVEIAA 499

  Fly   509 QTQKMHQSGKVSPEMASNLAGRQLTSAAIAHAHAFFTRNALEQVEALRKKGDLSPNVSLILGQLV 573
            :..:.|.|.:.|.|:|.||....|..|:.||.|....:...:::..::.|.     |..:|..|.
  Rat   500 KNLQTHVSHRKSKEVAWNLTSVDLVRASEAHCHYVVVKVFSDKLPKIQDKA-----VQAVLRNLC 559

  Fly   574 ELFVIDTFLRQSGCVLRWNNGITGTQLRFVERRFEELLAKLRPNAVALVDGFDFHDRVLGSTLGC 638
            .|:.:....::.|..|. .:.|||.||..|..|..|||..:|||||||||.|||.|..|||.||.
  Rat   560 LLYSLYGISQKGGDFLE-GSIITGAQLSQVNARILELLTLIRPNAVALVDAFDFKDMTLGSVLGR 623

  Fly   639 HDGRVYERLMEEARRNPINQEPVNSSFHNHLLPM 672
            :||.|||.|.|.|:::|:|:..|:.|:|.||.|:
  Rat   624 YDGNVYENLFEWAKKSPLNKTEVHESYHKHLKPL 657

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4586NP_572371.1 ACAD 6..653 CDD:299127 269/660 (41%)
PLN02443 7..677 CDD:178062 276/680 (41%)
Acox1NP_059036.1 AXO 3..638 CDD:173839 269/661 (41%)
Microbody targeting signal 659..661
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 150 1.000 Domainoid score I4279
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 544 1.000 Inparanoid score I1115
OMA 1 1.010 - - QHG54939
OrthoDB 1 1.010 - - D203634at33208
OrthoFinder 1 1.000 - - FOG0001030
OrthoInspector 1 1.000 - - otm44577
orthoMCL 1 0.900 - - OOG6_100457
Panther 1 1.100 - - O PTHR10909
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X618
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1312.880

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