DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4586 and gcdhb

DIOPT Version :9

Sequence 1:NP_572371.1 Gene:CG4586 / 31641 FlyBaseID:FBgn0029924 Length:677 Species:Drosophila melanogaster
Sequence 2:NP_001006024.1 Gene:gcdhb / 450003 ZFINID:ZDB-GENE-041010-117 Length:427 Species:Danio rerio


Alignment Length:338 Identity:79/338 - (23%)
Similarity:142/338 - (42%) Gaps:72/338 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 LRVHFSMFMTTLLSQGTEEQQAQWLNRSWHMDGVLGTYAQTELGHGTFVRGLETRADYDPITQEF 181
            :.|..|:.|..:.:.|||||:.::|.|....: :||.:..||..||:....:||:|.|:..:..|
Zfish   143 MSVQSSLVMHPINAYGTEEQKQKYLPRLAQGE-ILGCFGLTEPNHGSDPGSMETKAKYNSSSHTF 206

  Fly   182 ILNTPTQSSYKWWPGGLGNT--ANVAIVLAQLYVKGKHYGLQSFVVRIRDERTHEPLTGVDVGDI 244
                 |.:..|.|   :.|:  |::.:|.|:. ..||   ::.|::    ||   .:.|:....|
Zfish   207 -----TLTGSKTW---ITNSPVADICVVWAKC-EDGK---VRGFIL----ER---GMKGLSTPKI 252

  Fly   245 GPRLGGNGVNNGFLGLRDVRIPRNQMLMKNAQVLTDGTFVQGRPPLLLYGTMVYVRVITVKDVLF 309
            ..:........|.:.:.:|.:|...:|.|.:.:.  |.|          |.:...|.    .:.:
Zfish   253 EGKFSLRASATGMIIMDEVEVPEENLLPKASGLA--GPF----------GCLNNARY----GIAW 301

  Fly   310 GLLQAATI----ATRYSVVRRQSRINSDQPEVSVLDHITQQAKILPQIARGVSYRLVSDWLWRFY 370
            |.|.||..    |.:|::.|.|..:...:.::..    .:.|.:|.:|..|:...|   .|.|..
Zfish   302 GALGAAEFCFHAARQYTLDRIQFGVPLARNQLMQ----KKMADMLTEITLGLQSCL---QLGRLI 359

  Fly   371 EDVLRQLEDESTKGRNSLPELHAL---SCCLKAVATDEASEGVDLLRKSCGGHGFLSSAN-FDSI 431
            :|            :.:.||:.:|   :.|.||:  |.|.:..|:|    ||:|.....: ...:
Zfish   360 DD------------KKAAPEMISLLKRNSCGKAL--DIARQARDML----GGNGIADEYHIIRHV 406

  Fly   432 YGLTAATYTYEGE 444
            ..|.|.. ||||:
Zfish   407 LNLEAVN-TYEGQ 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4586NP_572371.1 ACAD 6..653 CDD:299127 79/338 (23%)
PLN02443 7..677 CDD:178062 79/338 (23%)
gcdhbNP_001006024.1 GCD 50..418 CDD:173840 78/336 (23%)
CaiA 62..426 CDD:224871 79/338 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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