DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4586 and Arc42

DIOPT Version :10

Sequence 1:NP_572371.1 Gene:CG4586 / 31641 FlyBaseID:FBgn0029924 Length:677 Species:Drosophila melanogaster
Sequence 2:NP_650840.1 Gene:Arc42 / 42364 FlyBaseID:FBgn0038742 Length:405 Species:Drosophila melanogaster


Alignment Length:392 Identity:82/392 - (20%)
Similarity:145/392 - (36%) Gaps:107/392 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 GTGLFQQSFP----------------LRVHFSMFMTTLLSQGTEEQQAQWLNRSWHMDGVLGTYA 155
            ||||...::.                :.|:.|:::..|||.|.:.|:..::......:.| |.:|
  Fly    83 GTGLDYVAYAIAMEEISRGCASAGVIMSVNNSLYLGPLLSFGNDAQKKDYITPFTTGERV-GCFA 146

  Fly   156 QTELGHGTFVRGLET----RADYDPITQEFILNTPTQSSYKWWPGGLGNT--ANVAIVLAQLYVK 214
            .:|.|:|:......|    :.|:      |:||     ..|.|   :.|.  |..|||.|....:
  Fly   147 LSEPGNGSDAGAASTIATDKGDH------FVLN-----GTKAW---ITNAFEAEAAIVFATTNKQ 197

  Fly   215 GKHYGLQSFVVRIRDERTHEPLTGVDVGDIGPRLGGNGVNNGFLGLRDVRIPRNQMLMKNAQVLT 279
            .||.|:.:|:|       .:...|..:|....:||..|.:...|...|..:|:..||        
  Fly   198 LKHKGISAFIV-------PKATKGFSLGKKEDKLGIRGSSTCQLIFEDCVVPKENML-------- 247

  Fly   280 DGTFVQGRPPLLLYGTMVYVRV-----ITVKDVLFGLLQAA-TIATRYSVVRRQ-----SRINSD 333
                  |.|.   :|..:.::.     |.:.....|:.||| .:|..|:..|:.     :::.|.
  Fly   248 ------GEPG---FGFKIAMQTLDAGRIGIAGQALGIGQAALELAVDYAQKRQAFGKPIAKLQSI 303

  Fly   334 QPEVSVLDHITQQAKILPQIARGVSYRLVSDWLWRFYEDVLRQLEDESTKGRNSLPELHALSCCL 398
            |.:::.:....:.|::|             .|...:.:|..:....|:                 
  Fly   304 QQKIADMSLAMESARLL-------------TWRAAWLKDQKQPYTKEA----------------- 338

  Fly   399 KAVATDEASEGVDLLRKSC----GGHGFLSSANFDSIYGLTAATYTYEGEYTVLLLQTARFLVRQ 459
             |:|...|||...|....|    ||.|:::....:..|.....|..|||...:..|..|..::::
  Fly   339 -AMAKLAASEAATLCSHQCIQILGGMGYVTDMAAERHYRDARITEIYEGTSEIQRLVIAGSILKE 402

  Fly   460 YA 461
            ||
  Fly   403 YA 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4586NP_572371.1 ACAD 6..653 CDD:447864 82/392 (21%)
Arc42NP_650840.1 SCAD_SBCAD 29..401 CDD:173847 80/387 (21%)

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