DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4586 and Gcdh

DIOPT Version :9

Sequence 1:NP_572371.1 Gene:CG4586 / 31641 FlyBaseID:FBgn0029924 Length:677 Species:Drosophila melanogaster
Sequence 2:NP_001038209.2 Gene:Gcdh / 270076 MGIID:104541 Length:447 Species:Mus musculus


Alignment Length:512 Identity:113/512 - (22%)
Similarity:190/512 - (37%) Gaps:174/512 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 GGSGQLEERRALERRFYEDPDFAEPVHPSCLSYKERYEQTVARSTRFLAKLRQWQREKQP----- 86
            |.|.:|..||: ..||   |.|.. ...|..::.|:.:...|:|:|   .:..|   |.|     
Mouse    14 GVSARLLSRRS-GLRF---PRFPR-TWSSAAAHTEKTQIRPAKSSR---PVFDW---KDPLILEE 67

  Fly    87 QLQLSVNMLRD-----------FRLLLS--------------GSLGT------------------ 108
            ||.....::||           .|:||:              |.||.                  
Mouse    68 QLTADEKLIRDTFRNYCQERLMSRILLANRNEVFHRDIVYEMGELGVLGPTIKGYGCAGVSSVAY 132

  Fly   109 GLFQQSFP---------LRVHFSMFMTTLLSQGTEEQQAQWLNRSWHMDG-----VLGTYAQTEL 159
            ||..:...         :.|..|:.|..:.:.|:|||:.::|      .|     :||.:..||.
Mouse   133 GLLTRELERVDSGYRSMMSVQSSLVMHPIYTYGSEEQRQKYL------PGLAKGELLGCFGLTEP 191

  Fly   160 GHGTFVRGLETRADYDPITQEFILNTPTQSSYKWWPGGLGNT--ANVAIVLAQLYVKGKHYGLQS 222
            .||:...|:||||.::|..|.:     |.|..|.|   :.|:  |::.||.|:.    :...::.
Mouse   192 NHGSDPGGMETRARHNPSNQSY-----TLSGTKTW---ITNSPVADLFIVWARC----EDNCIRG 244

  Fly   223 FVVRIRDERTHEPLTGVDVGDIGPRLGG----NGVNNGFLGLRDVRIPRNQMLMKNAQVLTDGTF 283
            |::       .:.:.|:.    .||:.|    .....|.:.:..|.:|...:| .|...|. |.|
Mouse   245 FIL-------EKGMRGLS----APRIEGKFSLRASATGMIIMDSVEVPEENVL-PNVSSLA-GPF 296

  Fly   284 VQGRPPLLLYGTMVYVRVITVKDVLFGLLQAATI----ATRYSVVRRQSRINSDQPEVSVLDHIT 344
              |......||            :.:|:|.||..    |.:|::.|.|..:...:      :.:.
Mouse   297 --GCLNTARYG------------ITWGVLGAAEFCLHTARQYALDRIQFGVPLAR------NQLV 341

  Fly   345 QQ--AKILPQIARGVSYRLVSDWLWRFYEDVLRQLEDESTKGRNSLPELHAL---SCCLKAVATD 404
            |:  |.:|.:|..|:...|           .|.:|:|:.    .:.||:.::   :.|.||:  |
Mouse   342 QKKLADMLTEITLGLHACL-----------QLGRLKDQD----KATPEMVSMLKRNNCGKAL--D 389

  Fly   405 EASEGVDLLRKSCGGHGFLS-------SANFDSIYGLTAATYTYEGEYTVLLLQTAR 454
            .|.:..|:|    ||:|...       :.|.:       |..||||.:.:..|...|
Mouse   390 IARQARDIL----GGNGISDEYHVIRHAMNLE-------AVNTYEGTHDIHALILGR 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4586NP_572371.1 ACAD 6..653 CDD:299127 113/512 (22%)
PLN02443 7..677 CDD:178062 113/512 (22%)
GcdhNP_001038209.2 GCD 57..443 CDD:173840 99/461 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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