DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4586 and GCDH

DIOPT Version :9

Sequence 1:NP_572371.1 Gene:CG4586 / 31641 FlyBaseID:FBgn0029924 Length:677 Species:Drosophila melanogaster
Sequence 2:NP_000150.1 Gene:GCDH / 2639 HGNCID:4189 Length:438 Species:Homo sapiens


Alignment Length:499 Identity:106/499 - (21%)
Similarity:184/499 - (36%) Gaps:160/499 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 RWWAGGSGQLEERRALERRFYED--PDFAEPVHPSCLSYKERYEQTVARSTRFLAKLRQWQREK- 84
            |.|...:.|.|:....:.:..:.  |:| :...|..|..:...::.:.|.|     .|.:.:|: 
Human    21 RTWVSSAAQTEKGGRTQSQLAKSSRPEF-DWQDPLVLEEQLTTDEILIRDT-----FRTYCQERL 79

  Fly    85 QPQLQLSVNMLRDFRLLLS--GSLGT------------------GLFQQSF---------PLRVH 120
            .|::.|:.......|.::|  |.||.                  ||..:..         .:.|.
Human    80 MPRILLANRNEVFHREIISEMGELGVLGPTIKGYGCAGVSSVAYGLLARELERVDSGYRSAMSVQ 144

  Fly   121 FSMFMTTLLSQGTEEQQAQWLNRSWHMDGVLGTYAQTELGHGTFVRGLETRADYDPITQEFILNT 185
            .|:.|..:.:.|:|||:.::|.:....: :||.:..||...|:....:||||.|:...:.:.|| 
Human   145 SSLVMHPIYAYGSEEQRQKYLPQLAKGE-LLGCFGLTEPNSGSDPSSMETRAHYNSSNKSYTLN- 207

  Fly   186 PTQSSYKWWPGGLGNTANVAIVLAQLYVKGKHYGLQSFVVRIRDERTHEPLTGVDVGDIGPRLGG 250
                ..|.|   :.|:.     :|.|           |||..|.|                    
Human   208 ----GTKTW---ITNSP-----MADL-----------FVVWARCE-------------------- 229

  Fly   251 NGVNNGFL---GLRDVRIPRNQ---MLMKNA--QVLTDGTFVQ-----------GRPPLLLYGTM 296
            :|...|||   |:|.:..||.|   .|..:|  .::.||..|.           |.|    :|.:
Human   230 DGCIRGFLLEKGMRGLSAPRIQGKFSLRASATGMIIMDGVEVPEENVLPGASSLGGP----FGCL 290

  Fly   297 VYVRVITVKDVLFGLLQAATI----ATRYSVVRRQSRINSDQPEVSVLDHITQQ--AKILPQIAR 355
            ...|.    .:.:|:|.|:..    |.:|::.|.|..:...:      :.:.|:  |.:|.:|..
Human   291 NNARY----GIAWGVLGASEFCLHTARQYALDRMQFGVPLAR------NQLIQKKLADMLTEITL 345

  Fly   356 GVSYRLVSDWLWRFYEDVLRQLEDESTKGRNSLPELHAL---SCCLKAVATDEASEGVDLLRKSC 417
            |:...|           .|.:|:|:.    .:.||:.:|   :.|.||:  |.|.:..|:|    
Human   346 GLHACL-----------QLGRLKDQD----KAAPEMVSLLKRNNCGKAL--DIARQARDML---- 389

  Fly   418 GGHGFLS-------SANFDSIYGLTAATYTYEGEYTVLLLQTAR 454
            ||:|...       :.|.:       |..||||.:.:..|...|
Human   390 GGNGISDEYHVIRHAMNLE-------AVNTYEGTHDIHALILGR 426

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG4586NP_572371.1 ACAD 6..653 CDD:299127 106/499 (21%)
PLN02443 7..677 CDD:178062 106/499 (21%)
GCDHNP_000150.1 GCD 48..434 CDD:173840 101/472 (21%)