DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4586 and Ivd

DIOPT Version :10

Sequence 1:NP_572371.1 Gene:CG4586 / 31641 FlyBaseID:FBgn0029924 Length:677 Species:Drosophila melanogaster
Sequence 2:NP_036724.1 Gene:Ivd / 24513 RGDID:2936 Length:424 Species:Rattus norvegicus


Alignment Length:432 Identity:80/432 - (18%)
Similarity:144/432 - (33%) Gaps:137/432 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 PVHPSCLSYKERYEQTVARSTRFLAKLRQWQREKQPQLQLSVNMLRDFRLLLS-----GSLGT-- 108
            ||........|..:|.....::|:      |....|:.| .::...||:.|..     ||||.  
  Rat    35 PVDDDINGLNEEQKQLRHTISKFV------QENLAPKAQ-EIDQSNDFKNLREFWKQLGSLGVLG 92

  Fly   109 ------------GLFQQSFPLR--------------VHFSMFMTTLLSQGTEEQQAQWLNRSWHM 147
                        |..:....:.              .|.::.:..::..|.|.|:.::|.:.  :
  Rat    93 ITAPVQYGGSGLGYLEHVLVMEEISRASAAVGLSYGAHSNLCINQIVRNGNEAQKEKYLPKL--I 155

  Fly   148 DG-VLGTYAQTELGHGTFVRGLETRADYDPITQEFILNTPTQSSYKWWPGGLGNTANVAIVLAQ- 210
            .| .:|..|.:|...|:.|..:..:|:..  ...::||     ..|:|... |..|:|.:|.|: 
  Rat   156 SGEFIGALAMSEPNAGSDVVSMRLKAEKK--GDHYVLN-----GNKFWITN-GPDADVLVVYAKT 212

  Fly   211 -LYVKGKHYGLQSFVVRIRDERTHEPLTGVDVGDIGPRLGGNGVNNGFLGLRDVRIPRNQML--- 271
             |.......|:.:|:|       .:.:.|........:||..|.|...|...|.::|...:|   
  Rat   213 DLTAVPASRGITAFIV-------EKDMPGFSTSKKLDKLGMRGSNTCELVFEDCKVPAANILSQE 270

  Fly   272 MKNAQVLTDGTFVQGRPPLLLYGTMVYVRVITVKDVLFGLLQAATIATRYSVVRRQSRINSDQPE 336
            .|...||..|..::   .|:|.|..:            |::||                      
  Rat   271 SKGVYVLMSGLDLE---RLVLAGGPL------------GIMQA---------------------- 298

  Fly   337 VSVLDHI------------------TQQAKILPQIARGVSYRLVSDWLWRFYEDVLRQLEDESTK 383
              ||||.                  ..|.|:.....|.::.|       ::..:|.|..::....
  Rat   299 --VLDHTIPYLHVREAFGQKIGQFQLMQGKMADMYTRLMACR-------QYVYNVARACDEGHIT 354

  Fly   384 GRNSLPE-LHALSCCLKAVATDEASEGVDLLRKSCGGHGFLS 424
            .::.... |:...|     ||..|.:|:..|    ||:|:::
  Rat   355 AKDCAGVILYTAEC-----ATQVALDGIQCL----GGNGYIN 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4586NP_572371.1 ACAD 6..653 CDD:447864 80/432 (19%)
IvdNP_036724.1 IVD 42..421 CDD:173845 78/425 (18%)

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