DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4586 and acdh-3

DIOPT Version :9

Sequence 1:NP_572371.1 Gene:CG4586 / 31641 FlyBaseID:FBgn0029924 Length:677 Species:Drosophila melanogaster
Sequence 2:NP_001370606.1 Gene:acdh-3 / 172351 WormBaseID:WBGene00019433 Length:419 Species:Caenorhabditis elegans


Alignment Length:450 Identity:85/450 - (18%)
Similarity:156/450 - (34%) Gaps:111/450 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 PSCLSYKERYEQTVARSTRFLA--KLRQWQREKQPQLQLSVNMLRDFRLLLSGSLGTGLFQQSFP 116
            ||.|......|.::..:.|..|  .::...||...:.|:       .:.:::|:...||.....|
 Worm    34 PSPLQQLSEEESSIVGTVRRFAVNVIKPLVREMDDKSQM-------HQSVITGTFENGLMGIEIP 91

  Fly   117 ------------------------------LRVHFSMFMTTLLSQGTEEQQAQWLNRSWHMDGVL 151
                                          :.|..::....::..|||||:.::|.:.  :...:
 Worm    92 EKYGGPGSSFFDAVLVIEELAKVDPSVSVFVDVQNTLVAPLIIQLGTEEQKQKYLPKI--VTEAI 154

  Fly   152 GTYAQTELGHGTFVRGLETRADYDPITQEFILNTPTQSSYKWWPGGLGNTANVAIVLAQLYVKGK 216
            |::|.:|.|.|:....|:|.|..|  ..:|::     |..|.|....|: |...:|.|.......
 Worm   155 GSFALSETGSGSDAFALKTTAKKD--GDDFVI-----SGSKMWITNAGH-AQFFLVFANADSAKG 211

  Fly   217 HYGLQSFVVRIRDERTHEPLTGVDVGDIGPRLGGNGVNNGFLGLRDVRIPRNQMLMKNAQVLTDG 281
            :.|:..|:|    :|..|   ||.||....:||....:...:...:||:.::.:|         |
 Worm   212 YKGITCFLV----DRNQE---GVSVGKKEDKLGIRASSTCSVHFDNVRVHKSSIL---------G 260

  Fly   282 TFVQGRPPLLLYGTMVYVRVITVKDV--------LFGLLQAATIATRYSVVRRQSRINSDQPEVS 338
            .:.:|           |...|...:.        :.||.|.....| ...::::.:......:..
 Worm   261 EYGKG-----------YKYAIECLNAGRIGIGAQMLGLAQGCFDQT-IPYLQQREQFGQRLIDFQ 313

  Fly   339 VLDHITQQAKILPQIARGVSYRLVSDWLWRFYEDVLRQLEDESTKGRNSLP---ELHALSCCLKA 400
            .:.|...|.::..:.||.:.|                   :.:...:|.||   |..........
 Worm   314 GMQHQIGQTRMEIEAARLLVY-------------------NAARMKQNGLPFVREAAMAKLFASQ 359

  Fly   401 VATDEASEGVDLLRKSCGGHGFLSSANFDSIYGLTAATYTYEGEYTVLLLQTARFLVRQY 460
            |||...|:.|:.|    ||.||......:..|..:.....|||...:.|...|:.:..:|
 Worm   360 VATTATSKCVEWL----GGVGFTKEFPVEKFYRDSKIGTIYEGTSNIQLNTIAKLVDIEY 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4586NP_572371.1 ACAD 6..653 CDD:299127 84/449 (19%)
PLN02443 7..677 CDD:178062 84/449 (19%)
acdh-3NP_001370606.1 SCAD_SBCAD 42..412 CDD:173847 81/437 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160163665
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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