DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4586 and Acox1

DIOPT Version :9

Sequence 1:NP_572371.1 Gene:CG4586 / 31641 FlyBaseID:FBgn0029924 Length:677 Species:Drosophila melanogaster
Sequence 2:NP_001258827.1 Gene:Acox1 / 11430 MGIID:1330812 Length:661 Species:Mus musculus


Alignment Length:696 Identity:273/696 - (39%)
Similarity:387/696 - (55%) Gaps:65/696 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VNADLQRERAAATLDSEDFARWWAGGSGQLEERRALERRFYEDPDFAEPVHPSCLSYKERYEQTV 67
            :|.||::||||||.:.|.......|.......||.:|.....||||....: :.|:..:|||..|
Mouse     1 MNPDLRKERAAATFNPELITHILDGSPENTRRRREIENLILNDPDFQHEDY-NFLTRSQRYEVAV 64

  Fly    68 ARSTRFLAKLRQ----------WQREKQPQLQLSVNMLRDFRLLLSGSLGTGLFQQSFPLRVHFS 122
            .:|...:.|:|:          |.::..     .||.:.                   |:.:::|
Mouse    65 KKSATMVKKMREFGIADPEEIMWFKKLH-----MVNFVE-------------------PVGLNYS 105

  Fly   123 MFMTTLLSQGTEEQQAQWLNRSWHMDGVLGTYAQTELGHGTFVRGLETRADYDPITQEFILNTPT 187
            ||:.|||:|||..||.:|::.|..:. ::|||||||:||||.:|||||.|.|||.|||||||:||
Mouse   106 MFIPTLLNQGTTAQQEKWMHPSQELQ-IIGTYAQTEMGHGTHLRGLETTATYDPKTQEFILNSPT 169

  Fly   188 QSSYKWWPGGLGNTANVAIVLAQLYVKGKHYGLQSFVVRIRDERTHEPLTGVDVGDIGPRLGGNG 252
            .:|.||||||||.|:|.|||||||..:|:.|||.:|||.||:..||:||.|:.||||||:.|...
Mouse   170 VTSIKWWPGGLGKTSNHAIVLAQLITRGECYGLHAFVVPIREIGTHKPLPGITVGDIGPKFGYEE 234

  Fly   253 VNNGFLGLRDVRIPRNQMLMKNAQVLTDGTFVQGRPPLLLYGTMVYVRVITVKDVLFGLLQAATI 317
            ::||:|.:.:.||||..||||.|||..|||:|:.....|.|||||:||...|......|.:|.||
Mouse   235 MDNGYLKMDNYRIPRENMLMKYAQVKPDGTYVKPLSNKLTYGTMVFVRSFLVGSAAQSLSKACTI 299

  Fly   318 ATRYSVVRRQSRINSDQPEVSVLDHITQQAKILPQIARGVSYRLVSDWLWRFYEDVLRQLEDEST 382
            |.|||.|||||.|...:||..:||..|||.|:.|.:|...::.    :|.|:.::...::.:...
Mouse   300 AIRYSAVRRQSEIKRSEPEPQILDFQTQQYKLFPLLATAYAFH----FLGRYIKETYMRINESIG 360

  Fly   383 KG-RNSLPELHALSCCLKAVATDEASEGVDLLRKSCGGHGFLSSANFDSIYGLTAATYTYEGEYT 446
            :| .:.|||||||:..|||..|..|:.|::..|.:|||||:..|:...:||.......|:|||.|
Mouse   361 QGDLSELPELHALTAGLKAFTTWTANAGIEECRMACGGHGYSHSSGIPNIYVTFTPACTFEGENT 425

  Fly   447 VLLLQTARFLVRQYADSLKRKVLPSSVSYLRDTARLIWGKNLVANCVRALEISAMEQVRDAW--- 508
            |::|||||||::.|......|::...||||.|..........||.....::|::::.:.:|:   
Mouse   426 VMMLQTARFLMKIYDQVQSGKLVGGMVSYLNDLPSQRIQPQQVAVWPTLVDINSLDSLTEAYKLR 490

  Fly   509 ------------QTQKMHQSGKVSPEMASNLAGRQLTSAAIAHAHAFFTRNALEQVEALRKKGDL 561
                        |.|..|:..|   |:|.||....|..|:.||.|....:...:::..::.:.  
Mouse   491 AARLVEIAAKNLQAQVSHRKSK---EVAWNLTSVDLVRASEAHCHYVTVKVFADKLPKIQDRA-- 550

  Fly   562 SPNVSLILGQLVELFVIDTFLRQSGCVLRWNNGITGTQLRFVERRFEELLAKLRPNAVALVDGFD 626
               |..:|..|..|:.:....::.|..|. .|.|||.|:..|..|..|||...|||||||||.||
Mouse   551 ---VQAVLRNLCLLYSLYGISQKGGDFLE-GNIITGAQMSQVNSRILELLTVTRPNAVALVDAFD 611

  Fly   627 FHDRVLGSTLGCHDGRVYERLMEEARRNPINQEPVNSSFHNHLLPM 672
            |.|..|||.||.:||.|||.|.|.|:::|:|:..|:.|::.||.|:
Mouse   612 FKDVTLGSVLGRYDGNVYENLFEWAKKSPLNKTEVHESYYKHLKPL 657

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4586NP_572371.1 ACAD 6..653 CDD:299127 265/672 (39%)
PLN02443 7..677 CDD:178062 271/692 (39%)
Acox1NP_001258827.1 AXO 3..638 CDD:173839 265/673 (39%)
Microbody targeting signal 659..661
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 151 1.000 Domainoid score I4331
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 539 1.000 Inparanoid score I1167
Isobase 1 0.950 - 0 Normalized mean entropy S1686
OMA 1 1.010 - - QHG54939
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001030
OrthoInspector 1 1.000 - - otm42514
orthoMCL 1 0.900 - - OOG6_100457
Panther 1 1.100 - - O PTHR10909
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X618
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.780

Return to query results.
Submit another query.