DRSC/TRiP Functional Genomics Resources

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Protein Alignment Setd3 and AT1G01920

DIOPT Version :9

Sequence 1:NP_727144.1 Gene:Setd3 / 31638 FlyBaseID:FBgn0052732 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_171694.3 Gene:AT1G01920 / 839313 AraportID:AT1G01920 Length:572 Species:Arabidopsis thaliana


Alignment Length:527 Identity:107/527 - (20%)
Similarity:188/527 - (35%) Gaps:150/527 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 AKVEAFSAWAKDGGVHSEGLEIAI---FPGYQLGLRATRPLAKDELVLSVPRKLILSEENNSDCR 177
            ||:|.|..|.:..|....|..|..   ..|:.: ..:|...|.||::|.||..|.::........
plant     8 AKLERFLDWLQVNGGELRGCNIKYSDSLKGFGI-FASTSTQASDEVLLVVPLDLAITPMRVLQDP 71

  Fly   178 LFG----KMTQATHLN----LAYDLVIEKIRGEFSEWRPYIDVLPAKYNTVLYFTTKQMELLRGT 234
            |.|    ||.:...::    :...|.:|::|.. |.|:||:|:||.::...|:|:...:..|:||
plant    72 LLGPECQKMFEQGQVDDRFLMILFLTLERLRIN-SSWKPYLDMLPTRFGNPLWFSDDDILELKGT 135

  Fly   235 AAAALAMRQCRVIAKQYAFLYKYAHTMTEPSTGNRSHPGERGLFFTQHGLCYKLYRWAVSTVMTR 299
            ........|.:.:...|....:...|......|:           ::..:.::.:.||.|...:|
plant   136 NLYHATELQKKKLLSLYHDKVEVLVTKLLILDGD-----------SESKVSFEHFLWANSVFWSR 189

  Fly   300 QNLVP--------------------SEKQES-------EDGPKLISA----------------LI 321
            ...:|                    ||..|:       |.|..|.||                |:
plant   190 ALNIPLPHSFVFPQSQDDTGECTSTSESPETAPVNSNEEKGKSLTSAQPAPSVGSGDTIWVEGLV 254

  Fly   322 PYWDMANHRPGKITSF----YATVSR-----QLECTAQEAVNTGEQFFIYYGDRSNTDLLVHNGF 377
            |..|..||....:.::    ..:|||     .|...||..: ..::..|.||::.|.:||...||
plant   255 PGIDFCNHDLKPVATWEVDGIGSVSRVPFSMYLLSVAQRPI-PKKEISISYGNKGNEELLYLYGF 318

  Fly   378 VDPNNTKDYVNIR---VGLSLTDAL---------------------AAKRASILDKLNIRHTAEL 418
            |..||..||:.|:   |...||..:                     :..:..:|:..|    |:|
plant   319 VIDNNPDDYLMIKEMLVNFVLTSVVTFNNGFIQVHYPVEAIPSIPFSDSKGQLLEAQN----AQL 379

  Fly   419 R-VLP-------------------------------------APDFISK-----ELLAFVRVFKM 440
            | :||                                     .|.:::|     :.:..:|...|
plant   380 RCLLPKSVLNHGFFPRTTSVIRESDEKETVRSCNFSWSGKRKMPTYMNKLVFPEDFMTGLRTIAM 444

  Fly   441 SAEQLDHWCSDLDRAGDLLHIDCALETDHETRTWQFLED--RLKLLLAVFNKEMHEADEVKELEL 503
            ..|::....:.|:...:....:...||:.....|:...|  .|:||:.:.|.:|.:.:|....|.
plant   445 QEEEIYKVSAMLEELVESRQGEQPSETEVRMAVWEACGDSGALQLLVDLLNSKMMKLEENSGTEE 509

  Fly   504 KDGQEIE 510
            :|.:.:|
plant   510 QDARLLE 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Setd3NP_727144.1 SET_SETD3 119..378 CDD:380953 69/321 (21%)
Rubis-subs-bind 400..524 CDD:370401 26/156 (17%)
AT1G01920NP_171694.3 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1337
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001685
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3007
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.810

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