DRSC/TRiP Functional Genomics Resources

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Protein Alignment Setd3 and AT2G18850

DIOPT Version :10

Sequence 1:NP_727144.1 Gene:Setd3 / 31638 FlyBaseID:FBgn0052732 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_179475.3 Gene:AT2G18850 / 816400 AraportID:AT2G18850 Length:543 Species:Arabidopsis thaliana


Alignment Length:470 Identity:115/470 - (24%)
Similarity:172/470 - (36%) Gaps:123/470 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 DQTRLAKVEAFSAWAKDGGVHSEGLEIAIFPGYQLGLRATRPLAKDELVLSVPRKLILSEE--NN 173
            |..|..|......|.:|.||.:: |:||...||..|..|:..|...::.|.:|...|:|||  .|
plant   143 DSYRCEKESKLVEWGQDNGVKTK-LQIAQIDGYGRGAIASEDLKFGDVALEIPVSSIISEEYVYN 206

  Fly   174 SD----CRLFGKMTQATHLNLAYDLVIEKIRGEFSEWRPYIDVLPAKYNTVLYFTTKQMELLRGT 234
            ||    ...|..:|..|.|.|   ..:.:.....|:::||.|.|...:.|.|.|....:..|.||
plant   207 SDMYPILETFDGITSETMLLL---WTMREKHNLDSKFKPYFDSLQENFCTGLSFGVDAIMELDGT 268

  Fly   235 AAAALAMRQCRVIAKQYAFLYKYAHTMTEPSTGNRSHPGERGLFFTQHGLCYKLYRWAVSTVMTR 299
            ......|:...::.::|..|.        |...|........|:..:|      |.||.....:.
plant   269 LLLDEIMQAKELLRERYDELI--------PLLSNHREVFPPELYTWEH------YLWACELYYSN 319

  Fly   300 QNLVPSEKQESEDGPKLISALIPYWDMANH-------RPGKI----TSFYATVSRQLECTAQEAV 353
                 |.:.:..|| ||.:.|||.....||       :.||:    :|....|||  .|      
plant   320 -----SMQIKFPDG-KLKTCLIPVAGFLNHSIYPHIVKYGKVDIETSSLKFPVSR--PC------ 370

  Fly   354 NTGEQFFIYYGDRSNTDLLVHNGFVDPNNTKDYVNIRVGLSLTD-----------ALAAKRASIL 407
            |.|||.|:.||:.|::.||...||: |.....|..|.:...:.|           ....:...:.
plant   371 NKGEQCFLSYGNYSSSHLLTFYGFL-PKGDNPYDVIPLDFDVIDDEDIETEFSWTTHMLRGTWLS 434

  Fly   408 DKLNIRHTAELRVLPAPDFISKELLAFVRVFKMSAEQLDHWCSDLDRAGDLLHIDCALETDHETR 472
            ...||.|..    ||.|      ||.::|                 :|..|:|       ..||.
plant   435 SNHNIFHYG----LPTP------LLNYLR-----------------KAHGLVH-------HSETD 465

  Fly   473 TWQFLEDR---LKLLLAVFNKEMH---EADEVKE----------LELKDGQEIELMLFLYRRLER 521
            .|:.||..   |:.|.:.|:..|.   :||.:..          :|.|:.|         |::..
plant   466 LWKNLEVEIGVLENLQSTFDDMMQNLGDADSIDRENADWDVKLAMEFKERQ---------RKIVS 521

  Fly   522 SIL---AGALQYAQE 533
            |||   :..::..||
plant   522 SILDSCSAGIKLVQE 536

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Setd3NP_727144.1 SET_SETD3 119..378 CDD:380953 75/275 (27%)
Rubis-subs-bind 394..524 CDD:462737 29/156 (19%)
AT2G18850NP_179475.3 SET_LSMT 165..395 CDD:380925 71/261 (27%)

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