DRSC/TRiP Functional Genomics Resources

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Protein Alignment Setd3 and setd3

DIOPT Version :9

Sequence 1:NP_727144.1 Gene:Setd3 / 31638 FlyBaseID:FBgn0052732 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_956348.1 Gene:setd3 / 337193 ZFINID:ZDB-GENE-030131-9137 Length:596 Species:Danio rerio


Alignment Length:546 Identity:170/546 - (31%)
Similarity:259/546 - (47%) Gaps:84/546 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGKNTKRNKKTKQQQQQPQQNGVTASASGTAVEDFEDQQAASSLPSLNGKKRSQLNKLVEELLDL 65
            |||  |...||     |....|.||:.|                       ..::..|:.|||..
Zfish     1 MGK--KSRVKT-----QKSGTGATAAVS-----------------------PKEMMNLISELLQK 35

  Fly    66 VEKQPANPNEEWKQYGQLQELLKQIMILEEPLSQAVCPQISDSPDDQTRLAKVEAFSAWAKDGGV 130
            ......:|.:||::|.|::.|:::|...::.:|.:.         :..|........|||.:...
Zfish    36 CSSAAPSPGKEWEEYVQIRALVEKIRKKQKGMSVSF---------EGIREDFFSELMAWAAECRA 91

  Fly   131 HSEGLEIAIFPGYQLGLRATRPLAKDELVLSVPRKLILSEEN---------NSDCRLFGKMTQAT 186
            ..:|.||:.|.....||:||:.:..:||.|.:|||::::.|:         .|..|:...|...|
Zfish    92 SCDGFEISNFADEGYGLKATKDIKAEELFLWIPRKMLMTVESAKNSVLGPLYSQDRILQAMGNVT 156

  Fly   187 HLNLAYDLVIEKIRGEFSEWRPYIDVLPAKYNTVLYFTTKQMELLRGTAAAALAMRQCRVIAKQY 251
               ||..|:.|:.... |.|.|||..||::|:|.|||..:::..|..|.|....:.|.:..|:||
Zfish   157 ---LALHLLCERANPS-SPWLPYIKTLPSEYDTPLYFEEEEVRHLLATQAIQDVLSQYKNTARQY 217

  Fly   252 AFLYKYAHTMTEPSTGNRSHPGERGL----FFTQHGLCYKLYRWAVSTVMTRQNLVPSEKQESED 312
            |:.||..||          ||....|    .||     :..||||||:||||||.:|     :.|
Zfish   218 AYFYKVIHT----------HPNASKLPLKDAFT-----FDDYRWAVSSVMTRQNQIP-----TAD 262

  Fly   313 GPKLISALIPYWDMANHRPGKITSFYATVSRQLECTAQEAVNTGEQFFIYYGDRSNTDLLVHNGF 377
            |.::..||||.|||.||..|.||:.|.....:.||.|.:....|||.:|:||.|||.:.::||||
Zfish   263 GSRVTLALIPLWDMCNHTNGLITTGYNLEDDRCECVALKDYKEGEQIYIFYGTRSNAEFVIHNGF 327

  Fly   378 VDPNNTKDYVNIRVGLSLTDALAAKRASILDKLNIRHTAELRVLPAPDFISKELLAFVRVFKMSA 442
            ...:|..|.|.|::|:|..:.|.|.:|.:|.:..|..::...:..:...||.:||||:|||.|:.
Zfish   328 FFEDNAHDRVKIKLGVSKGERLYAMKAEVLARAGIPASSIFALHCSEPPISAQLLAFLRVFCMTE 392

  Fly   443 EQL-DHWCSD--LDRAGDLLHIDCALETDHETRTWQFLEDRLKLLLAVFNKEMHEAD----EVKE 500
            |:| |:...|  :::...|.:.:..:..::|.:.|.|||.|..|||..: |...|.|    |..:
Zfish   393 EELRDYLVGDHAINKIFTLGNTEFPVSWENEIKLWTFLETRAALLLKTY-KTASEEDRSMLEKPD 456

  Fly   501 LELKDGQEIELMLFLYRRLERSILAG 526
            |.|.....|:|.|.....||.::..|
Zfish   457 LSLHSRIAIKLRLAEKEILEHAVSCG 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Setd3NP_727144.1 SET_SETD3 119..378 CDD:380953 98/271 (36%)
Rubis-subs-bind 400..524 CDD:370401 39/130 (30%)
setd3NP_956348.1 S-adenosyl-L-methionine binding. /evidence=ECO:0000250|UniProtKB:Q86TU7 104..106 0/1 (0%)
SET <275..314 CDD:279228 15/38 (39%)
S-adenosyl-L-methionine binding. /evidence=ECO:0000250|UniProtKB:Q86TU7 275..279 2/3 (67%)
S-adenosyl-L-methionine binding. /evidence=ECO:0000250|UniProtKB:Q86TU7 325..327 1/1 (100%)
Rubis-subs-bind 353..475 CDD:286371 36/122 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 556..596
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594260
Domainoid 1 1.000 130 1.000 Domainoid score I5182
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 222 1.000 Inparanoid score I3515
OMA 1 1.010 - - QHG55129
OrthoDB 1 1.010 - - D407981at33208
OrthoFinder 1 1.000 - - FOG0001685
OrthoInspector 1 1.000 - - oto39587
orthoMCL 1 0.900 - - OOG6_101154
Panther 1 1.100 - - LDO PTHR13271
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1321
SonicParanoid 1 1.000 - - X3007
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1312.940

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