DRSC/TRiP Functional Genomics Resources

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Protein Alignment Setd3 and Setd3

DIOPT Version :9

Sequence 1:NP_727144.1 Gene:Setd3 / 31638 FlyBaseID:FBgn0052732 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_001333399.1 Gene:Setd3 / 299295 RGDID:1309550 Length:596 Species:Rattus norvegicus


Alignment Length:556 Identity:186/556 - (33%)
Similarity:278/556 - (50%) Gaps:86/556 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGKNTKRNKKTKQQQQQPQQNGVTASASGTAVEDFEDQQAASSLPSLNGKKRSQLNKLVEELLDL 65
            |||  |...||     |....|.||:.|...:                      || |..|||..
  Rat     1 MGK--KSRVKT-----QKSGTGATATVSPKEI----------------------LN-LTSELLQK 35

  Fly    66 VEKQPANPNEEWKQYGQLQELLKQIMILEEPLSQAVCPQISD-SPDDQTRLAKVEAFSAWAKDGG 129
            .......|.:||::|.|::.|:::|...::.||.....:..| .||    |.|      ||.:.|
  Rat    36 CSSPAPGPGKEWEEYTQIRALVEKIRKKQKGLSVTFDGKREDYFPD----LMK------WASENG 90

  Fly   130 VHSEGLEIAIFPGYQLGLRATRPLAKDELVLSVPRKLILSEEN--NSDCRLFG------KMTQAT 186
            ...||.|:..|.....||||||.:..:||.|.|||||:::.|:  ||   :.|      ::.||.
  Rat    91 ASVEGFEMVNFKEEGFGLRATRDIKAEELFLWVPRKLLMTVESAKNS---ILGPLYSQDRILQAM 152

  Fly   187 -HLNLAYDLVIEKIRGEFSEWRPYIDVLPAKYNTVLYFTTKQMELLRGTAAAALAMRQCRVIAKQ 250
             ::.||:.|:.|:.... |.|:|||..||::|:|.|||..:::..|:.|.|......|.:..|:|
  Rat   153 GNIALAFHLLCERASPN-SFWQPYIQTLPSEYDTPLYFEEEEVRCLQSTQAIHDVFSQYKNTARQ 216

  Fly   251 YAFLYKYAHTMTEPSTGNRSHPGERGL----FFTQHGLCYKLYRWAVSTVMTRQNLVPSEKQESE 311
            ||:.||...|          ||....|    .||     |:.||||||:||||||.:|     :|
  Rat   217 YAYFYKVIQT----------HPHANKLPLKDSFT-----YEDYRWAVSSVMTRQNQIP-----TE 261

  Fly   312 DGPKLISALIPYWDMANHRPGKITSFYATVSRQLECTAQEAVNTGEQFFIYYGDRSNTDLLVHNG 376
            ||.::..||||.|||.||..|.||:.|.....:.||.|.:....|:|.:|:||.|||.:.::|:|
  Rat   262 DGSRVTLALIPLWDMCNHTNGLITTGYNLEDDRCECVALQDFQAGDQIYIFYGTRSNAEFVIHSG 326

  Fly   377 FVDPNNTKDYVNIRVGLSLTDALAAKRASILDKLNIRHTAELRVLPAPDFISKELLAFVRVFKMS 441
            |...||:.|.|.|::|:|.:|.|.|.:|.:|.:..|..::...:......||.:||||:|||.|:
  Rat   327 FFFDNNSHDRVKIKLGVSKSDRLYAMKAEVLARAGIPTSSVFALHFTEPPISAQLLAFLRVFCMT 391

  Fly   442 AEQL-DHWCSD--LDRAGDLLHIDCALETDHETRTWQFLEDRLKLLLAVFNKEMHEADEV---KE 500
            .|:| :|...|  :||...|.:.:..:..|:|.:.|.|||||..|||..:...:.|...|   .:
  Rat   392 EEELKEHLLGDSAIDRIFTLGNSEFPVSWDNEVKLWTFLEDRASLLLKTYKTTIEEDKTVLKNPD 456

  Fly   501 LELKDGQEIELMLFLYRRLERSILAGAL--QYAQEH 534
            |.::....|:|.|.....||:::.:.|:  :|.::|
  Rat   457 LSVRATMAIKLRLGEKEILEKAVKSAAMNREYYRKH 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Setd3NP_727144.1 SET_SETD3 119..378 CDD:380953 102/271 (38%)
Rubis-subs-bind 400..524 CDD:370401 40/129 (31%)
Setd3NP_001333399.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22 7/20 (35%)
S-adenosyl-L-methionine binding. /evidence=ECO:0000250|UniProtKB:Q86TU7 104..106 0/1 (0%)
S-adenosyl-L-methionine binding. /evidence=ECO:0000250|UniProtKB:Q86TU7 275..279 1/7 (14%)
S-adenosyl-L-methionine binding. /evidence=ECO:0000250|UniProtKB:Q86TU7 325..327 1/1 (100%)
Rubis-subs-bind 350..475 CDD:337340 43/127 (34%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 551..596
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166352328
Domainoid 1 1.000 137 1.000 Domainoid score I4761
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 246 1.000 Inparanoid score I3190
OMA 1 1.010 - - QHG55129
OrthoDB 1 1.010 - - D407981at33208
OrthoFinder 1 1.000 - - FOG0001685
OrthoInspector 1 1.000 - - otm45815
orthoMCL 1 0.900 - - OOG6_101154
Panther 1 1.100 - - LDO PTHR13271
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3007
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1211.910

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