DRSC/TRiP Functional Genomics Resources

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Protein Alignment Setd3 and CG33230

DIOPT Version :9

Sequence 1:NP_727144.1 Gene:Setd3 / 31638 FlyBaseID:FBgn0052732 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_995955.1 Gene:CG33230 / 2768998 FlyBaseID:FBgn0053230 Length:446 Species:Drosophila melanogaster


Alignment Length:440 Identity:89/440 - (20%)
Similarity:145/440 - (32%) Gaps:155/440 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   155 KDELV-------LSV-------PRKLILSEENNSDCRLFGKMTQATH--LNLAYDLVIEKIR--- 200
            :|||:       :|:       |.|.:..||      ||.|.::.:.  |...|.|..:.::   
  Fly    62 EDELIRLPIGCLISIATLESDGPFKSLFDEE------LFDKDSRISFQALIACYILYHKHLQECT 120

  Fly   201 --GEFSEWRPYIDVLPAKYNTVLYFTTKQME-----LLRGTAAAALAMRQCRVIAKQYAFLYKYA 258
              ...|.:..|:|.||..|:|..:.:..:::     ||..|.|      |.|.|...:..:....
  Fly   121 LGTHSSTYAAYLDTLPRCYSTPYFCSIPELQCLPESLLERTVA------QNRQIRGYFEIIKNIV 179

  Fly   259 HTMTEPSTGNRSHPGERGLFFTQHGLCYKLY----------RWAVSTVMTRQNLVPSE--KQESE 311
            |                     :...|.|.|          :||..:|.||...:.|.  |::|.
  Fly   180 H---------------------KCDCCGKSYGQEIWTLADFKWAYFSVNTRSVHLSSRFLKKQSN 223

  Fly   312 DGPKLIS-----ALIPYWDMANHRPGKITSFYATVSRQLECTAQ---------------EAVNTG 356
            ....|||     ||.|:.|:.||            |.|:|.||.               ......
  Fly   224 YFQPLISGDTNLALAPFLDLFNH------------SDQVEITAGIEGPDYVLTLKSLPFSETKPY 276

  Fly   357 EQFFIYYGDRSNTDLLVHNGFVDPNNTKDYVNIRVGLSLTDALAAKRASILDKLNIRHTAELRVL 421
            :|.||.||...|..||...||....|..||..:               |:||   |.|..:....
  Fly   277 DQLFISYGALPNFKLLTEYGFWLRENKHDYFEV---------------SLLD---IEHMIKQNKE 323

  Fly   422 PAPDFISKELLAFVRVFKMSAEQLDHWCSDLDRAGDLLHID--CALETDHETRTWQFLEDRLKLL 484
            .:.....:.:..|:|...::.:.             .:|||  |:    |..|.         :|
  Fly   324 LSTQTFHRNIFKFIREHNLNDQM-------------FVHIDDGCS----HNLRV---------VL 362

  Fly   485 LAVFNKEMHEADEVKELELKDGQEIE------LMLFLYRRLERSILAGAL 528
            ..:|.::.:..:.:.::...|.::.:      ..|..|:..|..|..|.|
  Fly   363 HLIFKQQAYFPNILNQIAFGDAEQFQDVQPELSYLVEYKIKEYEIFGGEL 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Setd3NP_727144.1 SET_SETD3 119..378 CDD:380953 63/280 (23%)
Rubis-subs-bind 400..524 CDD:370401 19/131 (15%)
CG33230NP_995955.1 T6SS_VipB <229..>314 CDD:301628 29/114 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468142
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1337
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR13271
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1321
SonicParanoid 00.000 Not matched by this tool.
54.870

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