DRSC/TRiP Functional Genomics Resources

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Protein Alignment Setd3 and set-27

DIOPT Version :9

Sequence 1:NP_727144.1 Gene:Setd3 / 31638 FlyBaseID:FBgn0052732 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_497604.2 Gene:set-27 / 190607 WormBaseID:WBGene00022173 Length:502 Species:Caenorhabditis elegans


Alignment Length:539 Identity:141/539 - (26%)
Similarity:226/539 - (41%) Gaps:81/539 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 AASSLPSLNGKKRSQLNKLVEELLDLVEKQPANPNEEWKQYGQLQELLKQIMILEEPLSQAVCPQ 104
            |.|....|..:...::..|.||.|.  ::.|:|..|.||::.:::.:|..::.::..|.      
 Worm     2 APSPTAELEDQILGKIATLFEETLS--KQPPSNIVELWKEHVEIRRILNDVISIQAKLG------ 58

  Fly   105 ISDSPDDQTRLA-------KVEAFSAWAKDGGVHSEGLEIAIFPGYQLGLRATRPLAKDELVLSV 162
                 |...|||       .::.|.|||...|:....:.|.......|.|:||.|:.|..:|..|
 Worm    59 -----DTDERLANSKRDADSIKTFLAWADGVGIARNNVTIGSTKTAGLSLQATGPIPKSHIVARV 118

  Fly   163 PRKLILSEENNSDCRLFGKMTQ-------ATHLNLAYDLVIEKIRGEFSEWRPYIDVLPAKYNTV 220
            ||..:::.:......|..|..:       ..::.||..|..:.|:.|.|:|:.||.:||..:.|.
 Worm   119 PRHAMITLDLAKKSSLLKKAFEKDPIVGGMDNVGLALFLACQWIQNEKSKWKSYISILPTTFPTP 183

  Fly   221 LYFTTKQMELLRGTAAAALAMRQCRVIAKQYA-FLYKYAHTMTEPSTGNRS---HPGERGLF--- 278
            |:::.:|:..|:.:.....|:...|.|::|:. ||...|......:...|.   :..|..:|   
 Worm   184 LFYSEEQLLQLKPSPIFEEAILFYRTISRQFCYFLLAIAKNKIYEAAQRRKDARNAMETPIFYNV 248

  Fly   279 -FTQHGLCYKLYRWAVSTVMTRQNLVPSEKQESEDG-PKLISALIPYWDMANHRPGKITSFYATV 341
             |.......|||.|||..|.||.|:||||.|..||| |.:|.||||..|||||. ..:|......
 Worm   249 PFNVANFTPKLYFWAVGVVTTRVNMVPSENQVGEDGNPVIIPALIPVLDMANHE-NVLTDVLTEP 312

  Fly   342 SRQLECTAQEA----------VNTGEQFFIYYGDRSNTDLLVHNGFVDPNNTK-DYVNIRVGLSL 395
            ...|.|.:.|.          |..|.:..|:||.||..:.|:|||||...:.| |.:.:::|:..
 Worm   313 IEDLVCYSPEEECAVITSHCDVKAGNEVTIFYGCRSKGEHLLHNGFVPIYHGKFDVLKLKIGIPK 377

  Fly   396 TDALAAKRASILDKL--------NIRHTAELRVLPAPDFISKELLAFVRVFKMSAEQLDHWCSDL 452
            ||.....:..::.|.        ||.|.........|  ...:||.|..:| :|....:      
 Worm   378 TDKTLDAKKKLIQKFVKKVYCAGNIFHVDLYNYHEQP--FPLDLLMFAAIF-VSTTPTE------ 433

  Fly   453 DRAGDLLHIDCALETDHETRTWQFLEDRLKLLLAVFNKEMHEADEVKELELKDGQEIELMLFLYR 517
                     :.....::..:..:||:.|..||...:.... :|.::||:.: ||....|     :
 Worm   434 ---------EAVSAPENRKKGLEFLKTRFSLLKRSYESSF-DASKLKEIGI-DGDSARL-----K 482

  Fly   518 RLERSILAGALQYAQEHRK 536
            ..|..||..||.|.:...|
 Worm   483 SAELDILQLALNYCETLEK 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Setd3NP_727144.1 SET_SETD3 119..378 CDD:380953 88/284 (31%)
Rubis-subs-bind 400..524 CDD:370401 22/131 (17%)
set-27NP_497604.2 SET_SETD3 76..360 CDD:380953 89/284 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166023
Domainoid 1 1.000 93 1.000 Domainoid score I4785
eggNOG 1 0.900 - - E1_KOG1337
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 138 1.000 Inparanoid score I3112
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55129
OrthoDB 1 1.010 - - D407981at33208
OrthoFinder 1 1.000 - - FOG0001685
OrthoInspector 1 1.000 - - oto17852
orthoMCL 1 0.900 - - OOG6_101154
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1321
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.700

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