DRSC/TRiP Functional Genomics Resources

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Protein Alignment Setd3 and setd6

DIOPT Version :9

Sequence 1:NP_727144.1 Gene:Setd3 / 31638 FlyBaseID:FBgn0052732 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_001096520.1 Gene:setd6 / 100125156 XenbaseID:XB-GENE-998235 Length:454 Species:Xenopus tropicalis


Alignment Length:469 Identity:110/469 - (23%)
Similarity:170/469 - (36%) Gaps:112/469 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 VEAFSAWAKDGG--------VHSEGLEIAIFPGYQLGLRATRPLAKDELVLSVPRKLILSEENNS 174
            |..|.||.|..|        :.:||..      .|.|:.|...|:..||:.|:||..|||:....
 Frog    22 VSCFLAWCKKVGLELNPKVYISTEGTV------SQYGMLAREDLSDGELLFSIPRSAILSQNTTR 80

  Fly   175 DCRLFGKMTQATH---------LNLAYDLVIEKIRGEFSEWRPYIDVLP---AKYNTVLYFTTKQ 227
            ...|..|...:..         ::|.|:..     ...|.|.||..:.|   .....:.:...:|
 Frog    81 IRDLIEKEQDSLQSCSGWVPLLISLLYEAT-----DSSSHWAPYFGLWPELDPPDMPMFWSEEEQ 140

  Fly   228 MELLRGTAAAALAMRQCRVIAKQYAFLYKYAHTMTEPSTGNRSHPGERGLFFTQHGLCYKLYRWA 292
            .:||:||.......:..:.|.|:|       :::..|..  |.:|.:    |........||:..
 Frog   141 TKLLQGTGILEAVHKDLKNIEKEY-------NSIVLPFI--RRNPEK----FCPMKHTLDLYKRL 192

  Fly   293 VSTVMTRQNLVPSEKQESEDGPK--LISALIPYWDMANHRPGKITSFYATVSRQLEC---TAQEA 352
            |:.||......|.|:.|.||..|  |...::|..|:.||    :....|.:....||   ...::
 Frog   193 VAFVMAYSFQEPQEEDEEEDIEKDILPPMMVPVADLLNH----VAQHNAHLEFTPECLRMITTKS 253

  Fly   353 VNTGEQFFIYYGDRSNTDLLVHNGFVDP-----NNTKD--YVNIR-----VGLSLTDAL-AAKRA 404
            |..|::.|..||..:|..||...||.:|     |.|.|  .|.:|     |..:..|.| ..||.
 Frog   254 VCAGQELFNTYGQMANWQLLHMYGFAEPHPQNCNETADIQMVTVREAAFQVARTEEDRLEMQKRW 318

  Fly   405 SILDKLNIRHTAELRVLPAPDFIS-KELLAFVRVFKMSAEQL------DHWCSDLDRAGD----- 457
            ..|..:.|.......|....:.:: :||.|.::|..||.::.      |.|..|.|....     
 Frog   319 DFLCHIEIVGEEGAFVFGLEEVMTEEELKACLKVLCMSTDEFAEYKENDGWEEDEDNDEQTLLTQ 383

  Fly   458 -----------LLHIDCALETDHETRTWQFLEDRLKLLLAVFN----------KEMHEADEVKEL 501
                       |||:...|       |.:..:..|.:..|:.|          :|.|      .|
 Frog   384 EISRLPIPWRKLLHLSAEL-------TLKAYKTELSMDEALVNDPTAYAKLSSREQH------SL 435

  Fly   502 ELKDGQEIELMLFL 515
            :::.||:..|.|.|
 Frog   436 QVQYGQKKILHLLL 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Setd3NP_727144.1 SET_SETD3 119..378 CDD:380953 68/283 (24%)
Rubis-subs-bind 400..524 CDD:370401 31/149 (21%)
setd6NP_001096520.1 SET <225..265 CDD:307139 9/43 (21%)
Rubis-subs-bind 314..445 CDD:312693 28/143 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1321
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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