DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cht11 and AT4G19820

DIOPT Version :9

Sequence 1:NP_572361.1 Gene:Cht11 / 31630 FlyBaseID:FBgn0029913 Length:432 Species:Drosophila melanogaster
Sequence 2:NP_001320000.1 Gene:AT4G19820 / 827726 AraportID:AT4G19820 Length:368 Species:Arabidopsis thaliana


Alignment Length:352 Identity:95/352 - (26%)
Similarity:160/352 - (45%) Gaps:53/352 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 YYASDGTHNLSLLDVPGDLCTHINIGPATLDNAT--IVLPDTLRQVLQNDTRSFRAAHPQVHLLL 134
            |:.::....|:.:|  ..|.||:....|.::..|  :::....:......|::.|..:|.|..||
plant    30 YWFAESESPLAQID--SSLFTHLFCAFADINTLTYQVIVSSRNKPKFSTFTQTVRRRNPTVKTLL 92

  Fly   135 WIGGADS-GRSFALMVANHAMRKLFLRSLREILRTYPSLDGIDLDWEFPSAYDRERMHLSQLLYE 198
            .|||..: ..:||.|.:|...||||:.|..::.|:. ...|:||:|::|| ...|..:..:||.|
plant    93 SIGGDFTYNFAFASMASNPTSRKLFISSSIKLARSC-GFHGLDLNWKYPS-ITTEMDNFGKLLRE 155

  Fly   199 IRTEWRREKRTND----ILSLAVAAPEGIAFYAYD----IREINLYA---DYVNLMSYDFHFYRE 252
            .|.....|.|::.    :|:.||       ||:|.    :..:|..|   |:|||::||| :...
plant   156 WRLAVEAEARSSGKPRLLLTAAV-------FYSYSYYSVLHPVNAVADSLDWVNLVAYDF-YESG 212

  Fly   253 DTPFTGLNAPLY-----ARSQERSLMATFNINYTVQWWLKSGLEPQRLVVGLPTYGHSFTLVNPL 312
            .:..|...||||     ..|.:..:.|          |.::||..::.|:|.|.||:::.|.:..
plant   213 SSRVTCSPAPLYDPITTGPSGDAGVRA----------WTQAGLPAKKAVLGFPLYGYAWCLTDAK 267

  Fly   313 NHRIGAPASG--YGKCGQLGFTTLTETCECVTKFF---KPNLSYDAESCSPYLSALQEWISYENQ 372
            ||...|.:||  ....|.:|:       :.:.:|.   |..:.|::.....|..|.:.||.|::.
plant   268 NHNYYANSSGPAISPDGSIGY-------DQIRRFIVDNKATMVYNSNLVQNYCYAKKTWIGYDDN 325

  Fly   373 TSIACKANYVKSLNLGGVMVFSLNTDD 399
            .||..|..|.|...|.|...:.:..||
plant   326 QSIVMKVKYAKQRGLLGYFSWHIGADD 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht11NP_572361.1 Glyco_18 68..398 CDD:214753 93/349 (27%)
GH18_chitinase-like 69..428 CDD:299167 95/352 (27%)
AT4G19820NP_001320000.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG58170
OrthoDB 1 1.010 - - D826687at2759
OrthoFinder 1 1.000 - - FOG0000107
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11177
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
76.890

Return to query results.
Submit another query.