DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Cht11 and ChiC

DIOPT Version :9

Sequence 1:	NP_572361.1	Gene:	Cht11 / 31630	FlyBaseID:	FBgn0029913	Length:	432	Species:	Drosophila melanogaster
Sequence 2:	NP_001319999.1	Gene:	ChiC / 827725	AraportID:	AT4G19810	Length:	379	Species:	Arabidopsis thaliana

Alignment Length:	386	Identity:	103/386 - (26%)
Similarity:	164/386 - (42%)	Gaps:	56/386 - (14%)

- Green bases have known domain annotations that are detailed below.

  Fly    36 SALLFSLLCLCLGFIGLGLLGIQTGEVHKVGQRLVCYYASDGTHNLSLLDVPGDLCTHINIGPAT 100
            |..|.||:.....|     |.:|......|.:....:.||:    ..:.|:...|.||:....|.
plant     3 STKLISLIVSITFF-----LTLQCSMAQTVVKASYWFPASE----FPVTDIDSSLFTHLFCAFAD 58

  Fly   101 LDNAT--IVLPDTLRQVLQNDTRSFRAAHPQVHLLLWIGGADSGR-SFALMVANHAMRKLFLRSL 162
            |::.|  :.:....:......|::.:..:|.|..||.|||..:.: ::|.|.:|...||.|:.|.
plant    59 LNSQTNQVTVSSANQPKFSTFTQTVQRRNPSVKTLLSIGGGIADKTAYASMASNPTSRKSFIDSS 123

  Fly   163 REILRTYPSLDGIDLDWEFPSAYDRERMHLSQLLYEIRTEWRREKRTNDILSLAVAAPEGIAFYA 227
            ..:.|:| ...|:|||||:||: ..|..:...||.|.|:....|..::....|.:||   ..||:
plant   124 IRVARSY-GFHGLDLDWEYPSS-ATEMTNFGTLLREWRSAVVAEASSSGKPRLLLAA---AVFYS 183

  Fly   228 -------YDIREINLYADYVNLMSYDFH---FYREDTP----FTGLNAPLYARSQERSLMATFNI 278
                   |.:..:....|:||||:|||:   :.|...|    |...||.....:..||
plant   184 NNYYSVLYPVSAVASSLDWVNLMAYDFYGPGWSRVTGPPAALFDPSNAGPSGDAGTRS------- 241

  Fly   279 NYTVQWWLKSGLEPQRLVVGLPTYGHSFTLVNPLNHRIGAPASG--YGKCGQLGFTTLTETCECV 341
                  |:::||..::.|:|.|.||:::.|.|..:|...||.:|  ....|.:|:..       :
plant   242 ------WIQAGLPAKKAVLGFPYYGYAWRLTNANSHSYYAPTTGAAISPDGSIGYGQ-------I 293

  Fly   342 TKFFKPN---LSYDAESCSPYLSALQEWISYENQTSIACKANYVKSLNLGGVMVFSLNTDD 399
            .||...|   ..|::.....|..|...||.|::..||..|..|.|...|.|...:.:..||
plant   294 RKFIVDNGATTVYNSTVVGDYCYAGTNWIGYDDNQSIVTKVRYAKQRGLLGYFSWHVGADD 354

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Cht11	NP_572361.1	Glyco_18	68..398	CDD:214753	93/351 (26%)
Cht11	NP_572361.1	GH18_chitinase-like	69..428	CDD:299167	95/353 (27%)
ChiC	NP_001319999.1	GH18_plant_chitinase_class_V	25..359	CDD:119358	96/359 (27%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG3325
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG58170
OrthoDB	1	1.010	-	-		D826687at2759
OrthoFinder	1	1.000	-	-		FOG0000107
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11177
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	7	6.890