DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht11 and Chia1

DIOPT Version :9

Sequence 1:NP_572361.1 Gene:Cht11 / 31630 FlyBaseID:FBgn0029913 Length:432 Species:Drosophila melanogaster
Sequence 2:NP_075675.2 Gene:Chia1 / 81600 MGIID:1932052 Length:473 Species:Mus musculus


Alignment Length:400 Identity:122/400 - (30%)
Similarity:195/400 - (48%) Gaps:50/400 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 LLGIQTGEVHKVGQRLVCYYAS-----DGTHNLSLLDVPGDLCTHINIGPATLDNATIVLPDTLR 113
            ||..|.|..:    .|:||:.:     .|..:....|:...||||:....|.:.|      :.:.
Mouse    13 LLNAQLGSAY----NLICYFTNWAQYRPGLGSFKPDDINPCLCTHLIYAFAGMQN------NEIT 67

  Fly   114 QVLQNDTRSFRA------AHPQVHLLLWIGGADSGRS-FALMVANHAMRKLFLRSLREILRTYPS 171
            .:..||...::|      .:.::..||.|||.:.|.: |..||:....|:.|:.|:.:.||.| .
Mouse    68 TIEWNDVTLYKAFNDLKNRNSKLKTLLAIGGWNFGTAPFTTMVSTSQNRQTFITSVIKFLRQY-G 131

  Fly   172 LDGIDLDWEFPSAYDR--ERMHL-SQLLYEIRTEWRRE----KRTNDILSLAVAAPEGIAFYAYD 229
            .||:|||||:|.:...  :..|| :.|:.|:|..:.:|    .|...:::.|||.........|:
Mouse   132 FDGLDLDWEYPGSRGSPPQDKHLFTVLVKEMREAFEQEAIESNRPRLMVTAAVAGGISNIQAGYE 196

  Fly   230 IREINLYADYVNLMSYDFHFYREDTPFTGLNAPLYARSQERSLMATFNINYTVQWWLKSGLEPQR 294
            |.|::.|.|::::|:||.|...|.  :||.|:|||....|....|..|::|.:.:|..:|...::
Mouse   197 IPELSKYLDFIHVMTYDLHGSWEG--YTGENSPLYKYPTETGSNAYLNVDYVMNYWKNNGAPAEK 259

  Fly   295 LVVGLPTYGHSFTLVNPLNHRIGAPASGYGKCG----QLGFTTLTETCECVTKFFKPNLS--YDA 353
            |:||.|.|||:|.|.||.::.||||.||.|..|    |.||....|.|    .|.:...:  :||
Mouse   260 LIVGFPEYGHTFILRNPSDNGIGAPTSGDGPAGPYTRQAGFWAYYEIC----TFLRSGATEVWDA 320

  Fly   354 ESCSPYLSALQEWISYENQTSIACKANYVKSLNLGGVMVFSLNTDDLKNSCSIMPNLKYSEKPVF 418
            ....||.....||:.|:|..|.:.||.::|..|.||.|:::::.||...|        :.::..|
Mouse   321 SQEVPYAYKANEWLGYDNIKSFSVKAQWLKQNNFGGAMIWAIDLDDFTGS--------FCDQGKF 377

  Fly   419 PLTQAIKDIL 428
            |||..:...|
Mouse   378 PLTSTLNKAL 387

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Cht11NP_572361.1 Glyco_18 68..398 CDD:214753 110/354 (31%)
GH18_chitinase-like 69..428 CDD:299167 117/383 (31%)
Chia1NP_075675.2 GH18_chitolectin_chitotriosidase 24..387 CDD:119351 117/383 (31%)
Glyco_18 24..365 CDD:214753 110/353 (31%)