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Protein Alignment Cht11 and Chit1

DIOPT Version :9

Sequence 1:	NP_572361.1	Gene:	Cht11 / 31630	FlyBaseID:	FBgn0029913	Length:	432	Species:	Drosophila melanogaster
Sequence 2:	NP_001271454.1	Gene:	Chit1 / 71884	MGIID:	1919134	Length:	464	Species:	Mus musculus

Alignment Length:	403	Identity:	129/403 - (32%)
Similarity:	200/403 - (49%)	Gaps:	60/403 - (14%)

- Green bases have known domain annotations that are detailed below.

  Fly    54 LLGIQTGEVHKVGQRLVCYYASDGTHNLSLL-----DVPGDLCTHINIGPATLDNATIVLPDTLR 113
            ||.:|.|...|    ||||..:...:....:     ||..:||||:....|.:||..:...:...
Mouse    13 LLMVQWGSAAK----LVCYLTNWSQYRTEAVRFFPRDVDPNLCTHVIFAFAGMDNHQLSTVEHND 73

  Fly   114 QVLQNDTRSFRAAHPQVHLLLWIGGADSG-RSFALMVANHAMRKLFLRSLREILRTYPSLDGIDL 177
            ::|..:..|.:..:|::..||.:||...| :.|..|||..:.|:.|::|....||| ...||:||
Mouse    74 ELLYQELNSLKTKNPKLKTLLAVGGWTFGTQKFTDMVATASNRQTFVKSALSFLRT-QGFDGLDL 137

  Fly   178 DWEFPS-----AYDRERMHLSQLLYEIRTEWRREKRTND----ILSLAVAAPEGIAFYAYDIREI 233
            |||||.     ..|:||  .:.|:.::...::.|.:::.    :|:.||.:..|:....|::.:|
Mouse   138 DWEFPGGRGSPTVDKER--FTALIQDLAKAFQEEAQSSGKERLLLTAAVPSDRGLVDAGYEVDKI 200

  Fly   234 NLYADYVNLMSYDFHFYREDTPFTGLNAPLYARSQERSLMATFNINYTVQWWLKSGLEPQRLVVG 298
            ....|::|||:||||...|.|  ||.|:|||.|..|....|..|::..|..||:.|....:|::|
Mouse   201 AQSLDFINLMAYDFHSSLEKT--TGHNSPLYKRQGESGAAAEQNVDAAVTLWLQKGTPASKLILG 263

  Fly   299 LPTYGHSFTLVNPLNHRIGAPASGYGKCGQLGFTTLTETCECVTKFFKPNLSYDAESCS------ 357
            :||||.||||.:..::.:||||:|.|..|.            .|| .|..|:| .|:||
Mouse   264 MPTYGRSFTLASSSDNGVGAPATGPGAPGP------------YTK-DKGVLAY-YEACSWKERHR 314

  Fly   358 ------PYLSALQEWISYENQTSIACKANYVKSLNLGGVMVFSLNTDDLKNS-CSIMPNLKYSEK 415
                  ||.....:|:|:::..|...||.|:|...|||.||:.|:.||.|.| |:..|
Mouse   315 IEDQKVPYAFQDNQWVSFDDVESFKAKAAYLKQKGLGGAMVWVLDLDDFKGSFCNQGP------- 372

  Fly   416 PVFPLTQAIKDIL 428
              :||.:.::..|
Mouse   373 --YPLIRTLRQEL 383

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.