DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht11 and chia.2

DIOPT Version :9

Sequence 1:NP_572361.1 Gene:Cht11 / 31630 FlyBaseID:FBgn0029913 Length:432 Species:Drosophila melanogaster
Sequence 2:NP_998414.1 Gene:chia.2 / 406338 ZFINID:ZDB-GENE-040426-2014 Length:470 Species:Danio rerio


Alignment Length:370 Identity:114/370 - (30%)
Similarity:188/370 - (50%) Gaps:35/370 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 GLGLLGIQTGEVHKVGQRLVCYYAS-----DGTHNLSLLDVPGDLCTHINIGPATLDNAT-IVLP 109
            ||||:........::|    ||:.:     .|....:..:|...||||:....|.:::|. ::..
Zfish     9 GLGLVLCHLAFSMEMG----CYFTNWSQYRPGIGKYTPANVDPFLCTHLFYAFAMINHANELITY 69

  Fly   110 DTLRQVLQNDTRSFRAAHPQVHLLLWIGGADSGRS-FALMVANHAMRKLFLRSLREILRTYPSLD 173
            :...:.|.......:..:|.:..||.:||.:.|.: |::||::.|.|:.|::|..:.|||| ..|
Zfish    70 EWNDETLYKAFNELKNTNPHLRTLLAVGGWNFGSTQFSIMVSSAANRQTFIQSSIKFLRTY-GFD 133

  Fly   174 GIDLDWEFPSA-----YDRERMHL--SQLLYEIRTEWRREKRTNDILSLAVAAPEGIAFYAYDIR 231
            |:|||||:|.:     .|::|..|  .:||.....|.:...|...:||.||:|.:|.....|:|.
Zfish   134 GMDLDWEYPGSRGSPPEDKQRFTLLCKELLEAYEAEGKATGRRRLMLSAAVSAGKGTIDDGYEIA 198

  Fly   232 EINLYADYVNLMSYDFHFYREDTPFTGLNAPLYARSQERSLMATFNINYTVQWWLKSGLEPQRLV 296
            ||..|.|::|:|:||||...|  .|||.|:|||..|::...:..||.:|.:::|..:|...::|.
Zfish   199 EIAKYLDFINIMTYDFHGTWE--RFTGHNSPLYQGSKDEGDLVYFNTDYAMRYWRDNGTPVEKLR 261

  Fly   297 VGLPTYGHSFTLVNPLNHRIGAPASGYGKCG----QLGFTTLTETC---ECVTKFFKPNLSYDAE 354
            :|..|||.:|.|.:. :..:||||||....|    :.||.:..|.|   |..|      :.:..:
Zfish   262 MGFATYGRTFRLTSS-DTSVGAPASGPASAGTYTREAGFWSYYEICGFLEGTT------VQWIDD 319

  Fly   355 SCSPYLSALQEWISYENQTSIACKANYVKSLNLGGVMVFSLNTDD 399
            ...||.:...||:.::.:.|...|..|:|....||..|::|:.||
Zfish   320 QKVPYATKNSEWVGFDTKESYETKVRYLKDKKFGGAFVWALDLDD 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht11NP_572361.1 Glyco_18 68..398 CDD:214753 107/350 (31%)
GH18_chitinase-like 69..428 CDD:299167 109/352 (31%)
chia.2NP_998414.1 GH18_chitolectin_chitotriosidase 23..385 CDD:119351 110/356 (31%)
Glyco_18 24..363 CDD:214753 108/352 (31%)
CBM_14 423..468 CDD:279884
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG58170
OrthoDB 1 1.010 - - D264489at33208
OrthoFinder 1 1.000 - - FOG0000107
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.930

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