DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht11 and RGD1309110

DIOPT Version :9

Sequence 1:NP_572361.1 Gene:Cht11 / 31630 FlyBaseID:FBgn0029913 Length:432 Species:Drosophila melanogaster
Sequence 2:XP_006233175.1 Gene:RGD1309110 / 295352 RGDID:1309110 Length:440 Species:Rattus norvegicus


Alignment Length:428 Identity:128/428 - (29%)
Similarity:207/428 - (48%) Gaps:63/428 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 LRTLVCWSALLFSLLCLCLGFIGLG-LLGIQTGEVHKVGQRLVCY------YASDGTHNLSLLDV 86
            ||..:  |.|:|        .:||. ||.:|....:    :|:||      |..| ...:.|.|:
  Rat    14 LRAFI--SKLVF--------IMGLNLLLNVQLDSAY----QLMCYFNNWPQYQPD-VRGMKLDDI 63

  Fly    87 PGDLCTHINIGPATL--DNATIVLPDTLRQVLQNDTRSF---RAAHPQVHLLLWIG--GADSGRS 144
            ...||||:....|.:  :|.|:    |.|:.| :|.:.|   :..:.::..||.||  ..::| .
  Rat    64 DPCLCTHLIYSFAGIWENNNTM----TKRKDL-DDYKEFNDLKKRNNKLKTLLSIGCWNFEAG-L 122

  Fly   145 FALMVANHAMRKLFLRSLREILRTYPSLDGIDLDWEFPSAYDR--ERMHLSQLL-YEIRTEWRRE 206
            |..||:....|..|:.|:|:.||.| ..||::|.|::|..|..  :..||..:| .|||..:.:|
  Rat   123 FITMVSTPESRHTFITSVRKFLRKY-GFDGLNLAWQYPGCYGSPPKDKHLFTILTQEIRKAFEKE 186

  Fly   207 ----KRTNDILSLAVAAPEGIAFYAYDIREINLYADYVNLMSYDFHFYREDTPFTGLNAPLYARS 267
                |::..|::.|:|.......:.|.:.:::...||:.:|:||.|...:.  :||.|:|||...
  Rat   187 VSKNKKSRLIITAALAGVISPIQFGYHVPQLSQSLDYIQVMTYDLHGSWDG--YTGENSPLYKSP 249

  Fly   268 QERSLMATFNINYTVQWWLKSGLEPQRLVVGLPTYGHSFTLVNPLNHRIGAPASGYGKCG----Q 328
            .|..:.|.:||.||:..|...|:.|::|:||.|.|||:|.|.:.....||||::..|..|    :
  Rat   250 AETGVKAFYNIKYTMHNWKNKGVSPEKLIVGFPAYGHTFILSDSTKTEIGAPSNRGGHPGPYTKK 314

  Fly   329 LGFTTLTETCECVTKFFKPNL--SYDAESCSPYLSALQEWISYENQTSIACKANYVKSLNLGGVM 391
            .||....|.|    .|.|...  .::|....||.....||:.|:|..|...||.::|:.|.||.|
  Rat   315 TGFWAYYEIC----AFLKNGAIQVWNAAQQVPYAFHGNEWVGYDNVKSFHIKAQWLKNNNFGGAM 375

  Fly   392 VFSLNTDDLKNSCSIMPNLKYSEKPVFPLTQAIKDILR 429
            ::::..||...|        :.::..||||..:|:.|:
  Rat   376 IWAIGMDDYTGS--------FCDQGPFPLTSTLKNALK 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht11NP_572361.1 Glyco_18 68..398 CDD:214753 109/355 (31%)
GH18_chitinase-like 69..428 CDD:299167 117/384 (30%)
RGD1309110XP_006233175.1 GH18_chitolectin_chitotriosidase 41..404 CDD:119351 117/384 (30%)
Glyco_18 43..382 CDD:214753 108/352 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG58170
OrthoDB 1 1.010 - - D264489at33208
OrthoFinder 1 1.000 - - FOG0000107
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11177
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.930

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