DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht11 and Chit1

DIOPT Version :10

Sequence 1:NP_572361.1 Gene:Cht11 / 31630 FlyBaseID:FBgn0029913 Length:432 Species:Drosophila melanogaster
Sequence 2:NP_001073157.1 Gene:Chit1 / 289032 RGDID:1305646 Length:464 Species:Rattus norvegicus


Alignment Length:390 Identity:122/390 - (31%)
Similarity:191/390 - (48%) Gaps:42/390 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 LLGIQTGEVHKVGQRLVCYYAS-----DGTHNLSLLDVPGDLCTHINIGPATLDNATIVLPDTLR 113
            ||.||.|...|    |.||:.:     .|.......||..:||||:....|.|:|..:...:...
  Rat    13 LLMIQWGSAAK----LFCYFTNWAQYRSGAARFLPRDVDPNLCTHVIYAFAGLNNHQVSTVEPND 73

  Fly   114 QVLQNDTRSFRAAHPQVHLLLWIGGADSG-RSFALMVANHAMRKLFLRSLREILRTYPSLDGIDL 177
            ::...:..|.:..:|::..||.:||...| :.|..|||..:.|:.|:.|....|||: ..||:||
  Rat    74 ELFYQELNSLKKRNPKLKTLLAVGGWSFGTQKFTDMVATASTRQTFVNSALSFLRTH-GFDGLDL 137

  Fly   178 DWEFPS-----AYDRERMHLSQLLYEIRTEWRREKRTND----ILSLAVAAPEGIAFYAYDIREI 233
            |||:|.     |.|:||  .:.|:.::...::.|.|.:.    :|:.||....|.....|::.:|
  Rat   138 DWEYPGSRGSPAVDKER--FTALIQDLAKAFQEEARASGKSRLLLTAAVPTGRGHVDAGYEVDKI 200

  Fly   234 NLYADYVNLMSYDFHFYREDTPFTGLNAPLYARSQERSLMATFNINYTVQWWLKSGLEPQRLVVG 298
            ....|::|||:||||...:.|  ||.|:|||.|..|....|..|::..|..||:.|....:|::|
  Rat   201 VQSLDFINLMAYDFHSSWDKT--TGHNSPLYKRQGETGKDAEKNVDAAVTLWLQKGTPASKLMLG 263

  Fly   299 LPTYGHSFTLVNPLNHRIGAPASGYGKCG----QLGFTTLTETCECVTKFFKPNLSYDAESCSPY 359
            :|.||.||||.:..:..:||||:|.|..|    :.|.....|.|.     :|.....:.:.. ||
  Rat   264 MPAYGRSFTLASSSDSGVGAPATGPGAPGPYTKEKGILVYFEVCS-----WKGKQRIEDQKV-PY 322

  Fly   360 LSALQEWISYENQTSIACKANYVKSLNLGGVMVFSLNTDDLKNSCSIMPNLKYSEKPVFPLTQAI 424
            :|...:|:.::::.|...||.|||...|||.||:.|:.||.|.|        :..:..:||.:.:
  Rat   323 VSQGNQWVGFDDRESFRAKAAYVKQKGLGGAMVWILDGDDFKGS--------FCNEGQYPLIRTL 379

  Fly   425  424
              Rat   380  379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht11NP_572361.1 Glyco_18 68..398 CDD:214753 110/348 (32%)
Chit1NP_001073157.1 GH18_chitolectin_chitotriosidase 24..383 CDD:119351 116/375 (31%)
ChtBD2 416..463 CDD:214696
Blue background indicates that the domain is not in the aligned region.

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