DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht11 and cht-4

DIOPT Version :9

Sequence 1:NP_572361.1 Gene:Cht11 / 31630 FlyBaseID:FBgn0029913 Length:432 Species:Drosophila melanogaster
Sequence 2:NP_497437.2 Gene:cht-4 / 189507 WormBaseID:WBGene00021252 Length:360 Species:Caenorhabditis elegans


Alignment Length:414 Identity:121/414 - (29%)
Similarity:184/414 - (44%) Gaps:84/414 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 LLFSLLCLCLGFIGLGLLGIQTGEVHKVGQRLVCYYASDGTHNLSLLDVPGDLCTHINIGPATLD 102
            |:||||.|.|             .||.|  .:.|||.   .:...:..||.:|||||     .|.
 Worm     4 LIFSLLLLIL-------------PVHTV--PVACYYI---LNQPDISKVPKNLCTHI-----ILI 45

  Fly   103 NATIVLPDTLRQVLQNDTRSFRAAHPQVHLLLWIGGADSGRSFALMVANHAMRKLFLRSLREILR 167
            |:..|..|...|..:.|...|.... ...:.|::....|..||:.:.:|..:...|..::.::|:
 Worm    46 NSAHVSEDGRLQGFEQDLEHFSELF-DGKIELFVSITSSNPSFSFLTSNTTLMHNFSSTVTQVLQ 109

  Fly   168 TYPSLDGIDLDWEFP----SAYDRERMHLSQLLYEIRTEWRREKRTNDILSLAVAAPEGIAFYAY 228
            .| .|:|:|:|||||    .|...::.|.:..|..:::..   |..:..||:||:.|..|:..||
 Worm   110 KY-RLNGVDIDWEFPVWSRDAQKSDKAHFATFLRILKSHL---KPADLKLSVAVSGPPTISRKAY 170

  Fly   229 DIREINLYADYVNLMSYDFH-FYREDTPFTGLNAPLYARSQERSLMATFNINYTVQWWLKSGLEP 292
            |:..:.:|||.|.:|:|||| |.|...||.|.||||:....|.|::...|...:::.|...||..
 Worm   171 DVDALKMYADMVQIMNYDFHVFNRYSNPFVGFNAPLHPMRAEISVLGEMNAEASMKTWYDLGLPR 235

  Fly   293 QRLVVGLPTYGHSFTLVNPLNHRIGAPA------------------SGYGKCGQLGFTTLTETCE 339
            .....|:|||..:|.|:....|:..:||                  |||       :||:     
 Worm   236 NISFFGIPTYARAFQLLTHYLHKPYSPAIRARPEITNLPDVCIFAQSGY-------YTTV----- 288

  Fly   340 CVTKFFKPNLSYDAESCSPYLSALQE-WISYENQTSIACKANYVKSLNLGGVMVFSLNTDDLKNS 403
                       ::..:.:|||..... |:|||||.||..|..:.:.|.:|||||||:.:||:...
 Worm   289 -----------WNHHAQAPYLYGDDGIWVSYENQQSILAKMAFARKLQVGGVMVFSIGSDDVTGK 342

  Fly   404 CSIMPNLKYSEKPVFPLTQAIKDI 427
            |...|         :||...|..:
 Worm   343 CGHGP---------YPLLTKISKL 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht11NP_572361.1 Glyco_18 68..398 CDD:214753 104/353 (29%)
GH18_chitinase-like 69..428 CDD:299167 111/383 (29%)
cht-4NP_497437.2 GH18_chitinase-like 30..357 CDD:385673 108/368 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 147 1.000 Domainoid score I2778
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H25323
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D264489at33208
OrthoFinder 1 1.000 - - FOG0000107
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11177
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R17095
SonicParanoid 1 1.000 - - X13778
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
109.910

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