DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cht11 and chil-23

DIOPT Version :9

Sequence 1:NP_572361.1 Gene:Cht11 / 31630 FlyBaseID:FBgn0029913 Length:432 Species:Drosophila melanogaster
Sequence 2:NP_001254212.1 Gene:chil-23 / 187739 WormBaseID:WBGene00011167 Length:432 Species:Caenorhabditis elegans


Alignment Length:435 Identity:100/435 - (22%)
Similarity:186/435 - (42%) Gaps:74/435 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 EQRNCSLRTLVCWSALLFSLLCLCLGFIGLGLLG-----IQTGEVHKVGQRLVCYYASDGTHNLS 82
            |||.....|...:..:..:|:.:.:...||||..     .::..:....:|::.||:..||.|::
 Worm    24 EQRVTKQPTSGKYIIITITLISIIIVGFGLGLCAQIYFQAESDVLPICDKRIIGYYSGSGTSNIT 88

  Fly    83 LLDVPGDLCTHINIGPATLDNATIVLPD---------------TLRQVLQNDTRSFRAAHPQVHL 132
            ...:..  .||      |:.....:.||               .|::|::|       .:.::.|
 Worm    89 STQLSN--LTH------TVFAFVYMTPDGTLLFNNQIEKNRFLKLKEVVRN-------GNSKIKL 138

  Fly   133 LLWIGGADSGRSFALMVANHAMRKLFLRSLREILRTYPSLDGIDLDWEFPSAYDRERMHLSQLLY 197
            :..|||.|:.:.|:.::.:....:.|:.|:.|.|..| .|||:||.|::|....|:...  ..:.
 Worm   139 MFSIGGKDNSKYFSSVIPSEERIQTFIESILEFLEAY-DLDGVDLFWKWPEEEYRDAYF--AFIN 200

  Fly   198 EIRTEWRREKRTNDILSLAVAAPEGIAFYAYDIREINLYADYVNLMSYDFHFYREDTP------- 255
            ::|..:..:|:.. |||:.:..|....:....:.:|....|::|..|.|::     ||       
 Worm   201 QLRKTFEAKKKYY-ILSIVIPPPTLDGWGKKRLNKIIESVDFINAYSTDYY-----TPLADNLSD 259

  Fly   256 -FTGLNAPLYARSQERSLMATFNINYTVQWWLKSGLEPQRLVVGLPTYGHSFTLV--NPLNHRIG 317
             ..|.:||:|..:|.:|   ..|:::|.:.:.....:..:..:.:|.|...:..|  ..|:.:.|
 Worm   260 DIAGPSAPIYFGAQGKS---ERNVHHTARNYSCLTKQASKFNIVIPFYATLWENVYETVLDSKRG 321

  Fly   318 A---PASGYGKCGQLGFTTLTETCECVTKFFKPNLSYD--AESCSPYLSALQEWISYENQTSIAC 377
            .   .|..||:  .:|.|.|:........|...:.|||  ..:...|...:..::::|.:.||..
 Worm   322 VYRHVAPFYGR--TVGKTYLSRLAVKQEGFQVESYSYDPAPRAAFSYNRTIGIYLTFETKESIRA 384

  Fly   378 KANYVKSLNLGGVMVFSLNTDDLKNS----------CSIMPNLKY 412
            |.:|||...||||.:||::.||..||          |:|....||
 Worm   385 KIDYVKDRILGGVWIFSVDMDDETNSQLKAVSFDGFCTIGNGSKY 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht11NP_572361.1 Glyco_18 68..398 CDD:214753 83/359 (23%)
GH18_chitinase-like 69..428 CDD:299167 90/384 (23%)
chil-23NP_001254212.1 Glyco_18 74..405 CDD:214753 83/359 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.