DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht11 and chil-17

DIOPT Version :10

Sequence 1:NP_572361.1 Gene:Cht11 / 31630 FlyBaseID:FBgn0029913 Length:432 Species:Drosophila melanogaster
Sequence 2:NP_496019.1 Gene:chil-17 / 187733 WormBaseID:WBGene00011159 Length:435 Species:Caenorhabditis elegans


Alignment Length:468 Identity:112/468 - (23%)
Similarity:205/468 - (43%) Gaps:93/468 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 NYEKLDGSSAGRITDELSRKEQRNCSLRTLVCWSALLFSLLCLCLGFIGLGLLGIQTGEVH---- 63
            ||..||     :......|:...|..|.|.:....::.|.:.|   |.|:....:.|...|    
 Worm     4 NYSLLD-----KFHSYYERRAHNNNELTTKLVKRVVIISGIFL---FCGIVSYALTTFVFHFYKE 60

  Fly    64 ------KVG------QRLVCYYASDGTHNLSLLDVPGDLCTHINIGPATLDNATIVLPD-----T 111
                  :||      :|:|.||:...:.::|...:            |.|.:|.....|     |
 Worm    61 DKFSKNEVGLDPICKRRIVGYYSEYDSTDISKNQL------------AKLTHAVFAFVDIKYDGT 113

  Fly   112 LR-QVLQNDTRSF------RAAHPQVHLLLWIGGADSGRSFALMVANHAMRKLFLRSLREILRTY 169
            |: :.|..:.:.|      |:.|..:.|:..|||.::...|:..:||..|:...:.|:...:.::
 Worm   114 LQFKNLITEQKFFSLKSKARSLHSNLKLMFSIGGDENSFDFSSALANTQMKSTLITSIIAFIHSH 178

  Fly   170 PSLDGIDLDWEFPSAYDRERMHLSQLLYEIRTEWRREKRTNDILSLAVAAPEGIAFY--AYDIRE 232
             .:||:||.|::|::  |::.:.:.|:.||| |...|.....|:|:.: .|.|::.:  .:|:..
 Worm   179 -MIDGVDLHWKWPTS--RDKSNYATLIREIR-EKVDELDAKIIISITI-PPVGVSDWESGFDLDA 238

  Fly   233 INLYADYVNLMSYDFHFYREDTPF-----TGLNAPLYARSQERSLMATFNI----NYTVQWWLKS 288
            |..:.|::|:.|.|   |.:..|.     ||.:|.:           .|||    :|.|.|.:|.
 Worm   239 IQKHVDFINVHSMD---YAKPLPNQWGTPTGPSASM-----------NFNIGLRQHYNVDWTMKH 289

  Fly   289 GL----EPQRLVVGLPTYGHSFTLV-NPLNHRIGAPASGYGKCGQL-GFTTLTE-TCECVTKFFK 346
            ..    :|..:.:.:|.|...:..| ..:::|.....:...|..:: |.:.|:. |.|.......
 Worm   290 YTCELKKPSMINLVIPFYVRMWKNVQKAIDNRTEVFRNVELKDNEVEGRSQLSRYTVEHEDMELS 354

  Fly   347 PNLSYDAESCSPYLSAL--QEWISYENQTSIACKANYVKSLNLGGVMVFSLNTDDLKNS--CSIM 407
            |. |:|..:.:||:..|  :.:.:|||:.||..|.:||..::||||.::|::.||..|:  ..:.
 Worm   355 PE-SWDNATQTPYVLDLKTRTFFTYENEKSIKVKLDYVNKMDLGGVWIWSVDMDDRLNTLLSFVF 418

  Fly   408 PN---LKYSEKPV 417
            ||   ..|||..:
 Worm   419 PNELCSSYSENGI 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht11NP_572361.1 Glyco_18 68..398 CDD:214753 88/361 (24%)
chil-17NP_496019.1 Glyco_18 77..407 CDD:214753 88/361 (24%)

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